RNA–Protein interactions for RNA: ENST00000554574.1

PPP4R3A-204, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 2

Gene PPP4R3A, Length 1,944 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-204ENST00000554574 FOLH1BQ9HBA9 442 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 FGF21Q9NSA1 209 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 PLCXD1Q9NUJ7 323 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 SCN3BQ9NY72 215 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 PTTG2Q9NZH5 202 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 TMEM9Q9P0T7 183 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 RNF6Q9Y252 685 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 U3KQA8 63 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 CPAMD8Q8IZJ3 1885 aa4.26□□□□□ -1.73
PPP4R3A-204ENST00000554574 EML6Q6ZMW3 1958 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 A0A087WUU8 490 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 IGKV3D-11A0A0A0MRZ8 115 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 A0A1B0GX78 115 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 CCDC160A6NGH7 325 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 H3BSA7 217 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 SPRY1O43609 319 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 TLX3O43711 291 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 XPNPEP2O43895 674 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 FMO6PO60774 539 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 PROP1O75360 226 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 OR5F1O95221 314 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ITIH1P19827 911 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 GSTM3P21266 225 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 PCMT1P22061 227 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 MMP11P24347 488 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 DCKP27707 260 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 FMO3P31513 532 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 IFNGR2P38484 337 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 IDH2P48735 452 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ZNF136P52737 540 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 SPOCK1Q08629 439 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 NEDD8Q15843 81 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 MAPK14Q16539 360 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 DECR1Q16698 335 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 PNLIPRP3Q17RR3 467 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ZSWIM7Q19AV6 140 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 MRPL2Q5T653 305 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 GUSBP11Q6P575 273 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 TRAT1Q6PIZ9 186 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ZNF836Q6ZNA1 936 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 Q6ZPB1 254 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ZNF788Q6ZQV5 615 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 RBPMS2Q6ZRY4 209 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 PRSS48Q7RTY5 328 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ARHGAP22Q7Z5H3 698 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ZER1Q7Z7L7 766 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 RANBP3LQ86VV4 465 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 GRAMD2AQ8IUY3 354 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 METTL27Q8N6F8 245 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ZNF615Q8N8J6 731 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 BOLLQ8N9W6 283 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 TEX45Q8NA69 505 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 OR7G1Q8NGA0 311 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 OR4D9Q8NGE8 314 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 OR13F1Q8NGS4 319 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 C16orf52Q8NHV5 167 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 DOK4Q8TEW6 326 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 APH1BQ8WW43 257 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 OIT3Q8WWZ8 545 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ACOT11Q8WXI4 607 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 SLC35B4Q969S0 331 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 DOK1Q99704 481 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 MCHR1Q99705 422 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 NAA11Q9BSU3 229 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 KCNN2Q9H2S1 579 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 GAREM1Q9H706 876 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 IMPAD1Q9NX62 359 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 RSL24D1Q9UHA3 163 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 SNX5Q9Y5X3 404 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 CACNA1HO95180 2353 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 KNTC1P50748 2209 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 TRAPPC13A5PLN9 417 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 CLDN24A6NM45 220 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 CPSF4LA6NMK7 179 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 A8MU76 341 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 C17orf105B2RV13 164 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 NPIPB9F8W1W9 429 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 IFNA16P05015 189 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 CT45A8P0DMV1 189 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 CT45A9P0DMV2 189 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 DRD5P21918 477 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 FBLP22087 321 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 PAX7P23759 505 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 MPGP29372 298 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 RORAP35398 523 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 EIF2S3P41091 472 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 OR1D4P47884 311 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 GSSP48637 474 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 SNRPGP62308 76 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ACY1Q03154 408 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 COL10A1Q03692 680 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 EMX1Q04741 257 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 FOXF2Q12947 444 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 TSPAN31Q12999 210 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 ZNF141Q15928 474 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 SMN1Q16637 294 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 CLPPQ16740 277 aaPredicted RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 EIF2S3LQ2VIR3 472 aaKnown RBP4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 CT45A2Q5DJT8 189 aa4.25□□□□□ -1.73
PPP4R3A-204ENST00000554574 SLX4IPQ5VYV7 408 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms