RNA–Protein interactions for RNA: ENST00000554264.5

VPS33B-203, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 4

Gene VPS33B, Length 389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-203ENST00000554264 RAB3BP20337 219 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF10P21506 573 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 PRKACBP22694 351 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ZFP36P26651 326 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 UQCRC1P31930 480 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 APOBEC3AP31941 199 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 EVI2BP34910 448 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 PTGS2P35354 604 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 TRIM23P36406 574 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 RBM34P42696 430 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 GPR1P46091 355 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 CCR9P51686 369 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 NCBP2P52298 156 aaKnown RBP eCLIP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 METAP1P53582 386 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 GMFBP60983 142 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 STXBP1P61764 594 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 TLE1Q04724 770 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SSBP1Q04837 148 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 LGALS3BPQ08380 585 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SNTB2Q13425 540 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 P2RY14Q15391 338 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 FCN2Q15485 313 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 HSPB2Q16082 182 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SYPL1Q16563 259 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 CCSMST1Q4G0I0 132 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 FLYWCH1Q4VC44 716 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 BCL2L15Q5TBC7 163 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 NDUFAF5Q5TEU4 345 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 FAM205BPQ63HN1 556 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 CTRB2Q6GPI1 263 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 HEPHL1Q6MZM0 1159 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ARHGAP11AQ6P4F7 1023 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 GUSBP11Q6P575 273 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF613Q6PF04 617 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 PAQR6Q6TCH4 344 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 FAM180AQ6UWF9 173 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 FAM198BQ6UWH4 519 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 TMEM91Q6ZNR0 172 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 RTL4Q6ZR62 310 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 Q6ZSR6 202 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 RFLNAQ6ZTI6 216 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 TMPRSS11FQ6ZWK6 438 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ERN2Q76MJ5 926 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 LRRTM4Q86VH4 590 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 PARGQ86W56 976 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 KLBQ86Z14 1044 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 OR8H3Q8N146 312 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SLC22A18ASQ8N1D0 253 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 IQCF1Q8N6M8 205 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SAMD12Q8N8I0 201 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 OR4M2Q8NGB6 313 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 OR4M1Q8NGD0 313 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 OR5W2Q8NH69 310 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 TRMT10AQ8TBZ6 339 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SMIM4Q8WVI0 70 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 OIT3Q8WWZ8 545 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 RAB40AQ8WXH6 277 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 RAB8BQ92930 207 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 EXOSC8Q96B26 276 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 RBM18Q96H35 190 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 GFM1Q96RP9 751 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 C17orf62Q9BQA9 187 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 UTP23Q9BRU9 249 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 DPH7Q9BTV6 452 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 CACNG6Q9BXT2 260 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 BEX2Q9BXY8 128 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF436Q9C0F3 470 aaPredicted RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 STRADBQ9C0K7 418 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SLC25A18Q9H1K4 315 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 PPIL3Q9H2H8 161 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF768Q9H5H4 540 aaKnown RBP5.38□□□□□ -1.55
VPS33B-203ENST00000554264 MVB12BQ9H7P6 319 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 GALNT9Q9HCQ5 603 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SLAMF7Q9NQ25 335 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ZC4H2Q9NQZ6 224 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 NANSQ9NR45 359 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 CMC2Q9NRP2 79 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 LANCL2Q9NS86 450 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 FBXL3Q9UKT7 428 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 SLC35A3Q9Y2D2 325 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ETV7Q9Y603 341 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 HS3ST3A1Q9Y663 406 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF780BQ9Y6R6 833 aa5.38□□□□□ -1.55
VPS33B-203ENST00000554264 PTPN13Q12923 2485 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 NINQ8N4C6 2090 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 CDHR4A6H8M9 788 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 URADA6NGE7 173 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 HMSDA8MTL9 139 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 FAM171A2A8MVW0 826 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 PRR23D1E9PI22 279 aaPredicted RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 GABARAPH6UMI1 98 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 I3L521 148 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 SAP18O00422 153 aaKnown RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 GPR171O14626 319 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 SSNA1O43805 119 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 TSPAN9O75954 239 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 ZNF432O94892 652 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 HMGN2P05204 90 aaKnown RBP5.37□□□□□ -1.55
VPS33B-203ENST00000554264 CHRM4P08173 479 aa5.37□□□□□ -1.55
VPS33B-203ENST00000554264 OR2T7P0C7T2 308 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms