RNA–Protein interactions for RNA: ENST00000553605.1

PRPF39-204, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 3

Gene PRPF39, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-204ENST00000553605 OPN1MWP04001 364 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 OPN1MW2P0DN77 364 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 OPN1MW3P0DN78 364 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 ACAA2P42765 397 aaKnown RBP11.6□□□□□ -0.55
PRPF39-204ENST00000553605 ESCO2Q56NI9 601 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 ATG16L1Q676U5 607 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 BTNL3Q6UXE8 466 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 LRRN1Q6UXK5 716 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 SNX32Q86XE0 403 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 SKA3Q8IX90 412 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 FGFBP3Q8TAT2 258 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 DYRK2Q92630 601 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 PPP1R14AQ96A00 147 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 NEURL3Q96EH8 262 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 SLC47A1Q96FL8 570 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 PPP3R2Q96LZ3 170 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 C1orf50Q9BV19 199 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 EMC6Q9BV81 110 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 PTDSS2Q9BVG9 487 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 BCL2L14Q9BZR8 327 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 SLC38A1Q9H2H9 487 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 MTHFD2LQ9H903 347 aaPredicted RBP11.6□□□□□ -0.55
PRPF39-204ENST00000553605 DCDC2Q9UHG0 476 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 GPR45Q9Y5Y3 372 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 POMT1Q9Y6A1 747 aa11.6□□□□□ -0.55
PRPF39-204ENST00000553605 LOC100653049A0A140TA62 436 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 LOC102725191A0A1B0GVB3 256 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 AIM2O14862 343 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 KRT34O76011 436 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 SLC7A5Q01650 507 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 HNRNPA0Q13151 305 aaKnown RBP11.59□□□□□ -0.55
PRPF39-204ENST00000553605 PMS2P3Q13401 168 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 SYPL1Q16563 259 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 TMEM155Q4W5P6 130 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 IL23RQ5VWK5 629 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 KANK2Q63ZY3 851 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 LRRC28Q86X40 367 aaPredicted RBP11.59□□□□□ -0.55
PRPF39-204ENST00000553605 POU5F2Q8N7G0 328 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 ANKFN1Q8N957 763 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 OR4A15Q8NGL6 344 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 PNPT1Q8TCS8 783 aaKnown RBP11.59□□□□□ -0.55
PRPF39-204ENST00000553605 ACMSDQ8TDX5 336 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 FAM71F1Q96KD3 344 aaPredicted RBP11.59□□□□□ -0.55
PRPF39-204ENST00000553605 TRNT1Q96Q11 434 aaKnown RBP11.59□□□□□ -0.55
PRPF39-204ENST00000553605 MECRQ9BV79 373 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 ULBP2Q9BZM5 246 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 DCAF16Q9NXF7 216 aa11.59□□□□□ -0.55
PRPF39-204ENST00000553605 A0A087WUV0 522 aaPredicted RBP11.58□□□□□ -0.56
PRPF39-204ENST00000553605 EXOC1LA0A1B0GW35 172 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 PLSCR5A0PG75 271 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 F5H0A9 414 aaPredicted RBP11.58□□□□□ -0.56
PRPF39-204ENST00000553605 M0R082 166 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 PLXNB1O43157 2135 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 TGDSO95455 350 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 DBIP07108 87 aaKnown RBP11.58□□□□□ -0.56
PRPF39-204ENST00000553605 MELTFP08582 738 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 RPS4Y1P22090 263 aaKnown RBP11.58□□□□□ -0.56
PRPF39-204ENST00000553605 UQCRC2P22695 453 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 MMP15P51511 669 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 BPIFB3P59826 476 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 PAX2Q02962 417 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 EGR4Q05215 589 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 OR4F3Q6IEY1 312 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 C11orf87Q6NUJ2 197 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 C6orf89Q6UWU4 347 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 H1FNTQ75WM6 255 aaPredicted RBP11.58□□□□□ -0.56
PRPF39-204ENST00000553605 PIWIL3Q7Z3Z3 882 aaKnown RBP11.58□□□□□ -0.56
PRPF39-204ENST00000553605 UEVLDQ8IX04 471 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 OR1J1Q8NGS3 322 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 OR6N1Q8NGY5 312 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 ZNF417Q8TAU3 575 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 TWIST2Q8WVJ9 160 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 GEMIN6Q8WXD5 167 aaKnown RBP11.58□□□□□ -0.56
PRPF39-204ENST00000553605 ZNF587Q96SQ5 575 aaPredicted RBP11.58□□□□□ -0.56
PRPF39-204ENST00000553605 NANOGQ9H9S0 305 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 NECAP2Q9NVZ3 263 aa11.58□□□□□ -0.56
PRPF39-204ENST00000553605 COL7A1Q02388 2944 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 CDHR4A6H8M9 788 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 H0YL77 283 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 HMGN4O00479 90 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 RNASET2O00584 256 aaKnown RBP11.57□□□□□ -0.56
PRPF39-204ENST00000553605 MFN2O95140 757 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 SNAP29O95721 258 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 PROCP04070 461 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 HLA-DOBP13765 273 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 NCF2P19878 526 aaPredicted RBP11.57□□□□□ -0.56
PRPF39-204ENST00000553605 GCAP28676 217 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 TBC1D28Q2M2D7 210 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 UGT3A2Q3SY77 523 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 SPRNQ5BIV9 151 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 C6orf136Q5SQH8 315 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 LRRC74BQ6ZQY2 392 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 HOMEZQ8IX15 550 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 MIER2Q8N344 545 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 SLC22A24Q8N4F4 322 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 FNDC5Q8NAU1 212 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 OR1J2Q8NGS2 313 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 TBC1D15Q8TC07 691 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 SSMEM1Q8WWF3 244 aa11.57□□□□□ -0.56
PRPF39-204ENST00000553605 RAB40AQ8WXH6 277 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms