RNA–Protein interactions for RNA: ENST00000553498.5

ATXN3-221, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 911 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-221ENST00000553498 OXA1LQ15070 435 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 CDK5R1Q15078 307 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ACKR1Q16570 336 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TRIM16LQ309B1 348 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 PLPPR5Q32ZL2 321 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 SOWAHCQ53LP3 525 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TEX30Q5JUR7 227 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF684Q5T5D7 378 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 VASNQ6EMK4 673 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 H3F3CQ6NXT2 135 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 DCDC5Q6ZRR9 648 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 GLRX5Q86SX6 157 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 RPS19BP1Q86WX3 136 aaKnown RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 CDC20BQ86Y33 519 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 MARCH9Q86YJ5 346 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 PLCZ1Q86YW0 608 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TIGD4Q8IY51 512 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 PARP16Q8N5Y8 322 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 GDPD1Q8N9F7 314 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 OR2M3Q8NG83 312 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 OR11G2Q8NGC1 345 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 OR10G3Q8NGC4 313 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 OR4K17Q8NGC6 315 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 OR6K6Q8NGW6 343 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ABHD4Q8TB40 342 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF519Q8TB69 540 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ASB15Q8WXK1 588 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TMEM203Q969S6 136 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 C8orf44Q96CB5 159 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 SLC25A36Q96CQ1 311 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 RASD2Q96D21 266 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 WDR89Q96FK6 387 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TRMT61AQ96FX7 289 aaKnown RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 CMTM3Q96MX0 182 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TM9SF2Q99805 663 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TMED9Q9BVK6 235 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 SPRY4Q9C004 299 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ISG20L2Q9H9L3 353 aaKnown RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 CHST11Q9NPF2 352 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 RPRD1BQ9NQG5 326 aaKnown RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 FAIMQ9NVQ4 179 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 NCDNQ9UBB6 729 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ST6GALNAC2Q9UJ37 374 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 TCFL5Q9UL49 500 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 FARSAQ9Y285 508 aaKnown RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 RPH3AQ9Y2J0 694 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 CHCHD2Q9Y6H1 151 aaPredicted RBP6.58□□□□□ -1.36
ATXN3-221ENST00000553498 PRUNE2Q8WUY3 3088 aa6.58□□□□□ -1.36
ATXN3-221ENST00000553498 ZC3H12DA2A288 527 aaKnown RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 LIPT2A6NK58 231 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 KRTAP9-1A8MXZ3 250 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 J3QRK9 145 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 CDX4O14627 284 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 RGS5O15539 181 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ARHGEF9O43307 516 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 EIF1BO60739 113 aaKnown RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF354AO60765 605 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TMCC2O75069 709 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ZNF254O75437 659 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 CBR3O75828 277 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 VAMP5O95183 116 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 APOA1P02647 267 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 RAF1P04049 648 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 HRGP04196 525 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 F13BP05160 661 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 SERPINA7P05543 415 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 GYPBP06028 91 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 MRPL3P09001 348 aaKnown RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 OCM2P0CE71 109 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 OCMP0CE72 109 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 AHCYP23526 432 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 CD82P27701 267 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 PYCR1P32322 319 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TNFSF8P32971 234 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ACVR1BP36896 505 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TGFBR1P36897 503 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 PSMD7P51665 324 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 OR12D2P58182 307 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 GPR85P60893 370 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ROM1Q03395 351 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TLE3Q04726 772 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 RASGEF1BQ0VAM2 473 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 CDC20Q12834 499 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 FOXF1Q12946 379 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 HNRNPA0Q13151 305 aaKnown RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 RIN1Q13671 783 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 LPAL2Q16609 132 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 SLC22A10Q63ZE4 541 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 HBMQ6B0K9 141 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TCEAL6Q6IPX3 200 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 FAM199XQ6PEV8 388 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 KCTD18Q6PI47 426 aaPredicted RBP6.57□□□□□ -1.36
ATXN3-221ENST00000553498 XKRXQ6PP77 449 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 DEGS2Q6QHC5 323 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 ARL9Q6T311 187 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 TMEM91Q6ZNR0 172 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 RAB43Q86YS6 212 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 OR6V1Q8N148 313 aa6.57□□□□□ -1.36
ATXN3-221ENST00000553498 CENPSQ8N2Z9 138 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms