RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 LIN7BQ9HAP6 207 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 MRPS7Q9Y2R9 242 aaKnown RBP11.7□□□□□ -0.54
SHMT2-205ENST00000553474 PI4KAP42356 2102 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 USP34Q70CQ2 3546 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 RALGAPA1Q6GYQ0 2036 aa11.7□□□□□ -0.54
SHMT2-205ENST00000553474 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 A0A1B0GVT2 93 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ACOD1A6NK06 481 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 TOX3O15405 576 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 OR2T1O43869 369 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 IGHMP01871 453 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 F13BP05160 661 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 H2AFB2P0C5Z0 115 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 GLB1P16278 677 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 GIFP27352 417 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 EVI2BP34910 448 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 GDNFP39905 211 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 OR1D4P47884 311 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 SRP9P49458 86 aaKnown RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 P2RX1P51575 399 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ART1P52961 327 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 PLCXD2Q0VAA5 305 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 NSDHLQ15738 373 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 PWWP2BQ6NUJ5 590 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 LUZP2Q86TE4 346 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 C9orf40Q8IXQ3 194 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF321PQ8N8H1 164 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 PLPP5Q8NEB5 264 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 OTOSQ8NHW6 89 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 C1orf216Q8TAB5 229 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 STK35Q8TDR2 534 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 GPR148Q8TDV2 347 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 FCAMRQ8WWV6 532 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 RGP1Q92546 391 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 HGDQ93099 445 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 TSLPQ969D9 159 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 CCDC74AQ96AQ1 378 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 CLIP3Q96DZ5 547 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 GAL3ST4Q96RP7 486 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 NUDT9Q9BW91 350 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 OR51J1Q9H342 316 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 DIABLOQ9NR28 239 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 PLSCR3Q9NRY6 295 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 FRRS1LQ9P0K9 344 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF346Q9UL40 294 aaKnown RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 A8MVM7 634 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 NPIPB7O75200 414 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF780AO75290 641 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 SERPINI2O75830 405 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 KRT33AO76009 404 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ALX3O95076 343 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 OR8G3PP0DMU2 310 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 GSG1Q2KHT4 349 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 LYSMD4Q5XG99 296 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 PMS2CLQ68D20 193 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 WDR74Q6RFH5 385 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 GRINAQ7Z429 371 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 SYT9Q86SS6 491 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF441Q8N8Z8 693 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ZBTB44Q8NCP5 570 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 OR2G2Q8NGZ5 317 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 METTL21AQ8WXB1 218 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 SLC25A38Q96DW6 304 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 GFI1Q99684 422 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 SRA1Q9HD15 236 aaKnown RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ANKRD10Q9NXR5 420 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 TAS2R5Q9NYW4 299 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 VSX1Q9NZR4 365 aaPredicted RBP11.69□□□□□ -0.54
SHMT2-205ENST00000553474 SRPK3Q9UPE1 567 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 MUC6Q6W4X9 2439 aa11.69□□□□□ -0.54
SHMT2-205ENST00000553474 ADAMTS9Q9P2N4 1935 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 TRAV6A0A075B6T7 132 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 TRBV5-7A0A0A0MS05 114 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 A0A1B0GVC2 190 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 A6NIN4 97 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 OR4C45A6NMZ5 311 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 PRR32B1ATL7 298 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 ACOT7O00154 380 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 GPR171O14626 319 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 PEX14O75381 377 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 DXOO77932 396 aaKnown RBP11.68□□□□□ -0.54
SHMT2-205ENST00000553474 TGM6O95932 706 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 ITPKBP27987 946 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 ABCD3P28288 659 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 NR0B1P51843 470 aaKnown RBP11.68□□□□□ -0.54
SHMT2-205ENST00000553474 NUBP1P53384 320 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 RPL27P61353 136 aaKnown RBP11.68□□□□□ -0.54
SHMT2-205ENST00000553474 KCNAB1Q14722 419 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 MFSD13AQ14CX5 517 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 TMEM69Q5SWH9 247 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 KCTD18Q6PI47 426 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-205ENST00000553474 DNM1P46Q6ZS02 220 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 LINGO2Q7L985 606 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 FAM109AQ8N4B1 249 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 ZNF433Q8N7K0 673 aaPredicted RBP11.68□□□□□ -0.54
SHMT2-205ENST00000553474 PRSS33Q8NF86 280 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 OR6N2Q8NGY6 317 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 OR1L3Q8NH93 324 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 TMEM234Q8WY98 164 aa11.68□□□□□ -0.54
SHMT2-205ENST00000553474 OMA1Q96E52 524 aa11.68□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms