RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 ZNF813Q6ZN06 617 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 MBOAT2Q6ZWT7 520 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 DTX2Q86UW9 622 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 DEFB107AQ8IZN7 70 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 FBXL14Q8N1E6 418 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 MCUR1Q96AQ8 359 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 FOXB1Q99853 325 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 NELFAQ9H3P2 528 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 MAN2C1Q9NTJ4 1040 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 FAM53CQ9NYF3 392 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 RHCGQ9UBD6 479 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 HIF3AQ9Y2N7 669 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 ATP23Q9Y6H3 246 aa13.38□□□□□ -0.27
SHMT2-204ENST00000553324 MAP1AP78559 2803 aaPredicted RBP13.38□□□□□ -0.27
SHMT2-204ENST00000553324 HIVEP1P15822 2718 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 ZNF469Q96JG9 3925 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-204ENST00000553324 A0A087WUU8 490 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 IGHV1-18A0A0C4DH31 117 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 EFCAB9A8MZ26 197 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 B2RBV5 119 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 E7EQL1 145 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 PRSS23O95084 383 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 IGLV1-44P01699 117 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 F13BP05160 661 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 H1F0P07305 194 aaKnown RBP13.37□□□□□ -0.27
SHMT2-204ENST00000553324 CALB2P22676 271 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 APOBEC3AP31941 199 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-204ENST00000553324 CAPZA2P47755 286 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 FABP6P51161 128 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 ATP5J2P56134 94 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 CLRN1P58418 232 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 NRN1LQ496H8 165 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 ALG10Q5BKT4 473 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 YTHDF3Q7Z739 585 aaKnown RBP13.37□□□□□ -0.27
SHMT2-204ENST00000553324 OAFQ86UD1 273 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 NRMQ8IXM6 262 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 MUC15Q8N387 334 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 WFDC11Q8NEX6 87 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 OR4F15Q8NGB8 312 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 FNDC8Q8TC99 324 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 NSMCE2Q96MF7 247 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 TRAF4Q9BUZ4 470 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-204ENST00000553324 NDEL1Q9GZM8 345 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 KRCC1Q9NPI7 259 aaPredicted RBP13.37□□□□□ -0.27
SHMT2-204ENST00000553324 CBLN4Q9NTU7 201 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 NDUFAF4Q9P032 175 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 FBXL3Q9UKT7 428 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 TMEM5Q9Y2B1 443 aa13.37□□□□□ -0.27
SHMT2-204ENST00000553324 ITPR3Q14573 2671 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 DHHO43323 396 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 FARS2O95363 451 aaKnown RBP13.36□□□□□ -0.27
SHMT2-204ENST00000553324 QDPRP09417 244 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 PGA4P0DJD7 388 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 PGA3P0DJD8 388 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 ACADSP16219 412 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 CHRNB3Q05901 458 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 MELKQ14680 651 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 HIST3H3Q16695 136 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 LRFN4Q6PJG9 635 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 TMPRSS11FQ6ZWK6 438 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 DPPA2Q7Z7J5 298 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 FAM156AQ8NDB6 213 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 POP5Q969H6 163 aaKnown RBP13.36□□□□□ -0.27
SHMT2-204ENST00000553324 C7orf34Q96L11 122 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 BDH2Q9BUT1 245 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 MRPL13Q9BYD1 178 aaKnown RBP13.36□□□□□ -0.27
SHMT2-204ENST00000553324 TXNIPQ9H3M7 391 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 MOKQ9UQ07 419 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 F8P00451 2351 aa13.36□□□□□ -0.27
SHMT2-204ENST00000553324 DSCAMO60469 2012 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 UBL3O95164 117 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 CD8AP01732 235 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 OR8G3PP0DMU2 310 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 CD79AP11912 226 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 MAKP20794 623 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 ZNF84P51523 738 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 TUBA1BP68363 451 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 TUBA4AP68366 448 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 NAAAQ02083 359 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 SPOCK1Q08629 439 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 GSG1Q2KHT4 349 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 ARMC4Q5T2S8 1044 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 FAM205BPQ63HN1 556 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 TUBA1AQ71U36 451 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 KRTAP1-3Q8IUG1 177 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 MOSPD2Q8NHP6 518 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 SLC7A13Q8TCU3 470 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 ASB10Q8WXI3 467 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 MCHR2Q969V1 340 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 RBP7Q96R05 134 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 ZNF347Q96SE7 839 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 SEPHS2Q99611 448 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 MUC13Q9H3R2 512 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 SMURF2Q9HAU4 748 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 BARX1Q9HBU1 254 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-204ENST00000553324 B3GNT2Q9NY97 397 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 FBXO9Q9UK97 447 aaPredicted RBP13.35□□□□□ -0.27
SHMT2-204ENST00000553324 CADP27708 2225 aa13.35□□□□□ -0.27
SHMT2-204ENST00000553324 ALPK2Q86TB3 2170 aa13.34□□□□□ -0.27
SHMT2-204ENST00000553324 A6NIZ1 184 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms