RNA–Protein interactions for RNA: ENST00000553309.5

ATXN3-218, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,022 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-218ENST00000553309 EIF2B3Q9NR50 452 aaKnown RBP4.23□□□□□ -1.73
ATXN3-218ENST00000553309 SLC35D1Q9NTN3 355 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 ZDHHC18Q9NUE0 388 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 ACOXLQ9NUZ1 547 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 RAB20Q9NX57 234 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 RNF14Q9UBS8 474 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 EPHA6Q9UF33 1036 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 TBC1D29Q9UFV1 150 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 WARS2Q9UGM6 360 aaKnown RBP4.23□□□□□ -1.73
ATXN3-218ENST00000553309 BCAP29Q9UHQ4 241 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF221Q9UK13 617 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 NOCTQ9UK39 431 aaKnown RBP4.23□□□□□ -1.73
ATXN3-218ENST00000553309 MGAT4BQ9UQ53 548 aa4.23□□□□□ -1.73
ATXN3-218ENST00000553309 FARSAQ9Y285 508 aaKnown RBP4.23□□□□□ -1.73
ATXN3-218ENST00000553309 MRPS28Q9Y2Q9 187 aaKnown RBP4.23□□□□□ -1.73
ATXN3-218ENST00000553309 INTS1Q8N201 2190 aaKnown RBP4.23□□□□□ -1.73
ATXN3-218ENST00000553309 CHD3Q12873 2000 aaKnown RBP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 RNF103-CHMP3A0A140T963 221 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 GSAPA4D1B5 854 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 NKX2-6A6NCS4 301 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 C5orf51A6NDU8 294 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PGPEP1LA6NFU8 196 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 MFSD2BA6NFX1 497 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ARHGAP42A6NI28 874 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 METTL15A6NJ78 407 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 E5RI56 91 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 F5H0A9 414 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 H0Y8G0 127 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 EEF2KO00418 725 aaKnown RBP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ARHGEF9O43307 516 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 SGCEO43556 437 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ALOX12BO75342 701 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ENTPD5O75356 428 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 CTAG2O75638 210 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 AHSA1O95433 338 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 UGT2B4P06133 528 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 YES1P07947 543 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 LINC00614P0C842 121 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 TRAPPC2P0DI81 140 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 TRAPPC2BP0DI82 140 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 RALBP11234 206 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PFKFB1P16118 471 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 TNNI3P19429 210 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PIK3R1P27986 724 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 RPL35P42766 123 aaKnown RBP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 CSNK1DP48730 415 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 FHITP49789 147 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 BMXP51813 675 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 AKR1D1P51857 326 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 NDST2P52849 883 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ESRRGP62508 458 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 MYBPC1Q00872 1141 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 DEFA6Q01524 100 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 STX4Q12846 297 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 DGCR6Q14129 220 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PDK2Q15119 407 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 DEFB113Q30KQ7 82 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PDLIM3Q53GG5 364 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 KLHL26Q53HC5 615 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PDZK1Q5T2W1 519 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 GCNT6Q5T4J0 391 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 RSBN1Q5VWQ0 802 aaPredicted RBP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 FAM91A1Q658Y4 838 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 CLEC6AQ6EIG7 209 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PWWP2BQ6NUJ5 590 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 C1orf94Q6P1W5 598 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 TFAP2EQ6VUC0 442 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 C3P1Q6ZMU1 363 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 LUZP2Q86TE4 346 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 CADM2Q8N3J6 435 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 DNAJC22Q8N4W6 341 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 TC2NQ8N9U0 490 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 OR6X1Q8NH79 312 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 AKR7LQ8NHP1 331 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PSMA8Q8TAA3 256 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 NANPQ8TBE9 248 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PAQR8Q8TEZ7 354 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 S100ZQ8WXG8 99 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 TAF15Q92804 592 aaKnown RBP eCLIP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 DAZLQ92904 295 aaKnown RBP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 SGTBQ96EQ0 304 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ZNF599Q96NL3 588 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 TAAR6Q96RI8 345 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PSMB7Q99436 277 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 DOK1Q99704 481 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 C2orf88Q9BSF0 95 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 TM6SF2Q9BZW4 377 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ST6GALNAC4Q9H4F1 302 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 RIBC2Q9H4K1 309 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 NINJ2Q9NZG7 142 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 CTSFQ9UBX1 484 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 RAB26Q9ULW5 256 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 SLC7A7Q9UM01 511 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 MGAT4AQ9UM21 535 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 HS3ST2Q9Y278 367 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 NDUFAF1Q9Y375 327 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 AP4S1Q9Y587 144 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 PUS1Q9Y606 427 aaKnown RBP eCLIP4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ZANQ9Y493 2812 aa4.22□□□□□ -1.73
ATXN3-218ENST00000553309 ANK3Q12955 4377 aaKnown RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms