RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 LRRN3E7EW58 273 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 SDHDO14521 159 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 TPD52L2O43399 206 aaKnown RBP7.72□□□□□ -1.17
SYNE2-209ENST00000553308 ZNF250P15622 560 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 GATA3P23771 443 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 FPR2P25090 351 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 SLC1A6P48664 564 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 CSNK1A1P48729 337 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 PUDPQ08623 228 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 RBBP4Q09028 425 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 IFFO1Q0D2I5 559 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 LRRC74AQ0VAA2 488 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 HNRNPA0Q13151 305 aaKnown RBP7.72□□□□□ -1.17
SYNE2-209ENST00000553308 PMS2P3Q13401 168 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 TSTQ16762 297 aaKnown RBP7.72□□□□□ -1.17
SYNE2-209ENST00000553308 TUSC1Q2TAM9 212 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 PCGF3Q3KNV8 242 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 ALG10BQ5I7T1 473 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 WDR88Q6ZMY6 472 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 NET1Q7Z628 596 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-209ENST00000553308 LRRC17Q8N6Y2 441 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 LSMEM1Q8N8F7 131 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 ICA1LQ8NDH6 482 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 SLC30A7Q8NEW0 376 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 SYNPRQ8TBG9 265 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 TAF15Q92804 592 aaKnown RBP eCLIP7.72□□□□□ -1.17
SYNE2-209ENST00000553308 MAL2Q969L2 176 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 SLC35B4Q969S0 331 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 LRRC58Q96CX6 371 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 ZBTB18Q99592 522 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 GAL3ST1Q99999 423 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 ASPNQ9BXN1 380 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 PNPOQ9NVS9 261 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 NKIRAS2Q9NYR9 191 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 GPR160Q9UJ42 338 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 HAO1Q9UJM8 370 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 FBXL3Q9UKT7 428 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.72□□□□□ -1.17
SYNE2-209ENST00000553308 GPR45Q9Y5Y3 372 aa7.72□□□□□ -1.17
SYNE2-209ENST00000553308 ARHGAP32A7KAX9 2087 aa7.71□□□□□ -1.17
SYNE2-209ENST00000553308 A0A0G2JK05 382 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 ISPDA4D126 451 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM247A6NEH6 219 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF726A6NNF4 738 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 C11orf98E9PRG8 122 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 ANP32DO95626 131 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 LCKP06239 509 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 ZCCHC18P0CG32 403 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 OR8G3PP0DMU2 310 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 MAKP20794 623 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 BGNP21810 368 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 AHCYP23526 432 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 PRTN3P24158 256 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 ZFP36P26651 326 aaKnown RBP7.71□□□□□ -1.18
SYNE2-209ENST00000553308 BIDP55957 195 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 SELENOVP59797 346 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 TEKQ02763 1124 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 HFEQ30201 348 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 MMEL1Q495T6 779 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 RBMS3Q6XE24 437 aaKnown RBP7.71□□□□□ -1.18
SYNE2-209ENST00000553308 DOK3Q7L591 496 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 PIWIL3Q7Z3Z3 882 aaKnown RBP7.71□□□□□ -1.18
SYNE2-209ENST00000553308 SNX32Q86XE0 403 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 BCL6BQ8N143 479 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-209ENST00000553308 SLC22A24Q8N4F4 322 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 SCAIQ8N9R8 606 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 OR6S1Q8NH40 331 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 BBS10Q8TAM1 723 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 DNAJA4Q8WW22 397 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-209ENST00000553308 TIMD4Q96H15 378 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 SH3GL3Q99963 347 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 WDR55Q9H6Y2 383 aaPredicted RBP7.71□□□□□ -1.18
SYNE2-209ENST00000553308 SAP30LQ9HAJ7 183 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 CDH20Q9HBT6 801 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 BCL2L10Q9HD36 194 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 A4GALTQ9NPC4 353 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 DECR2Q9NUI1 292 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM38BQ9NVV0 291 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 SLCO1C1Q9NYB5 712 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 MRPL39Q9NYK5 338 aaKnown RBP7.71□□□□□ -1.18
SYNE2-209ENST00000553308 UBAP1Q9NZ09 502 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 ZNF69Q9UC07 566 aa7.71□□□□□ -1.18
SYNE2-209ENST00000553308 WNK2Q9Y3S1 2297 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 SLC22A23A1A5C7 686 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 PLPP3O14495 311 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 BIRC5O15392 142 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 TPST1O60507 370 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 SNAP29O95721 258 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 IL6P05231 212 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 EPHA3P29320 983 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 PRKAR1BP31321 381 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 RBMXP38159 391 aaKnown RBP7.7□□□□□ -1.18
SYNE2-209ENST00000553308 RGNQ15493 299 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 ARMCX4Q5H9R4 360 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 TMEM255AQ5JRV8 349 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 KLF17Q5JT82 389 aaPredicted RBP7.7□□□□□ -1.18
SYNE2-209ENST00000553308 C6orf10Q5SRN2 563 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 ULK3Q6PHR2 472 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 PXKQ7Z7A4 578 aa7.7□□□□□ -1.18
SYNE2-209ENST00000553308 RETREG3Q86VR2 466 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms