RNA–Protein interactions for RNA: ENST00000553186.5

RBFOX1-215, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 2,196 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-215ENST00000553186 AQP7P3A6NL99 342 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 RAP1BP61224 184 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 RAP1AP62834 184 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 BDH1Q02338 343 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 TBC1D25Q3MII6 688 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 DYNC2LI1Q8TCX1 351 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 UFD1Q92890 307 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 TRMT61AQ96FX7 289 aaKnown RBP17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 KCNK17Q96T54 332 aa17.5■□□□□ 0.39
RBFOX1-215ENST00000553186 A0A0J9YW62 118 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 LOC102725191A0A1B0GVB3 256 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 LRRTM2O43300 516 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 CTLA4P16410 223 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 GDF1P27539 372 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 OR12D2P58182 307 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 MFAP5Q13361 173 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 CRTC2Q53ET0 693 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 WIPI1Q5MNZ9 446 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 VASNQ6EMK4 673 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 ZHX1-C8orf76Q96EF9 292 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 C4orf36Q96KX1 117 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 RNF32Q9H0A6 362 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 ZNF703Q9H7S9 590 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 STUB1Q9UNE7 303 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 IGLV1-36A0A0B4J1U3 117 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 TRAF3IP2O43734 574 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 TRAPPC6AO75865 159 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 MT-ND5P03915 603 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 SP1P08047 785 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 UGT2B10P36537 528 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 FAM205BPQ63HN1 556 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 SLC16A9Q7RTY1 509 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 KCNE4Q8WWG9 221 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 KLHL15Q96M94 604 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 RERGLQ9H628 205 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 MARCH7Q9H992 704 aa17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 SIRT4Q9Y6E7 314 aaPredicted RBP17.49■□□□□ 0.39
RBFOX1-215ENST00000553186 DCDC2BA2VCK2 349 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 H0YC42 278 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 GFRA3O60609 400 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 SLC16A7O60669 478 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 GPANK1O95872 356 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 CELP19835 753 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 CLDN20P56880 219 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 ETFDHQ16134 617 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 RSPO4Q2I0M5 234 aaPredicted RBP17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 TMEM225Q6GV28 225 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 GDPGP1Q6ZNW5 385 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 UEVLDQ8IX04 471 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 HAS2Q92819 552 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 TMEM203Q969S6 136 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 OXGR1Q96P68 337 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 MFRPQ9BY79 579 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 TSPAN10Q9H1Z9 355 aaPredicted RBP17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 DCSTAMPQ9H295 470 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 NCKAP5O14513 1909 aa17.48■□□□□ 0.39
RBFOX1-215ENST00000553186 TVP23AA6NH52 213 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 GJE1A6NN92 205 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 E9PI62 339 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 SEC14L5O43304 696 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 NME2P1O60361 137 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 NME2P22392 152 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 RFC3P40938 356 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 GFRA1P56159 465 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 RPS25P62851 125 aaKnown RBP17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 CDONQ4KMG0 1287 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 SLC25A25Q6KCM7 469 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 VASH1Q7L8A9 365 aaPredicted RBP17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 GPAT4Q86UL3 456 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 GGNQ86UU5 652 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 SYT14Q8NB59 555 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 SFXN2Q96NB2 322 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 EMC6Q9BV81 110 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 TTTY10Q9BZA0 68 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 WDR76Q9H967 626 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 KLHL13Q9P2N7 655 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 POLHQ9Y253 713 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 AKAP13Q12802 2813 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 J3QLW9 94 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 TNFSF11O14788 317 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 MAGEB4O15481 346 aaPredicted RBP17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 ZNF19P17023 458 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 GABRA5P31644 462 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 BIDP55957 195 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 CDC20Q12834 499 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 USP43Q70EL4 1123 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 GALNTL5Q7Z4T8 443 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 SYS1Q8N2H4 156 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 TM9SF2Q99805 663 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 MRPL13Q9BYD1 178 aaKnown RBP17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 TTTY12Q9BZ98 90 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 TRIM36Q9NQ86 728 aa17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 KLF13Q9Y2Y9 288 aaPredicted RBP17.47■□□□□ 0.39
RBFOX1-215ENST00000553186 EIF1BO60739 113 aaKnown RBP17.46■□□□□ 0.39
RBFOX1-215ENST00000553186 HPNP05981 417 aa17.46■□□□□ 0.39
RBFOX1-215ENST00000553186 ACTA2P62736 377 aa17.46■□□□□ 0.39
RBFOX1-215ENST00000553186 ACTG2P63267 376 aa17.46■□□□□ 0.39
RBFOX1-215ENST00000553186 CSNK2A1P68400 391 aaPredicted RBP17.46■□□□□ 0.39
RBFOX1-215ENST00000553186 CD200R1LQ6Q8B3 271 aa17.46■□□□□ 0.39
RBFOX1-215ENST00000553186 CDC20BQ86Y33 519 aa17.46■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms