RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 TMCC3Q9ULS5 477 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 MAGED1Q9Y5V3 778 aaPredicted RBP10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 SLC25A15Q9Y619 301 aa10.28□□□□□ -0.76
TRAFD1-209ENST00000552896 AKAP9Q99996 3911 aa10.27□□□□□ -0.76
TRAFD1-209ENST00000552896 ARPC4-TTLL3A0A0A6YYG9 625 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 TCRBV3S1A0A5B6 114 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 M0R3G1 203 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 NR2C1P13056 603 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 PAX7P23759 505 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 FPR3P25089 353 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 IFNGR2P38484 337 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 HMGA2P52926 109 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 ACKR1Q16570 336 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 CEACAM16Q2WEN9 425 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 TBRG1Q3YBR2 411 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 ZBED5Q49AG3 693 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 PHYHD1Q5SRE7 291 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 ARMC4Q5T2S8 1044 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 OR2T5Q6IEZ7 315 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 ANKRD16Q6P6B7 361 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 CCDC121Q6ZUS5 278 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF627Q7L945 461 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 SPATA24Q86W54 205 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 LINC00471Q8N535 108 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 LRRC75AQ8NAA5 344 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 OR4C15Q8NGM1 316 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 OR2T29Q8NH02 315 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 OR52N5Q8NH56 324 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 OR51A7Q8NH64 312 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 KCTD12Q96CX2 325 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 PLPPR2Q96GM1 343 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 GPX7Q96SL4 187 aaPredicted RBP10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 NELFAQ9H3P2 528 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 ESRP2Q9H6T0 727 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 MOV10Q9HCE1 1003 aaKnown RBP10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 GLTPQ9NZD2 209 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 NPAP1Q9NZP6 1156 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 AURKCQ9UQB9 309 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 SIGLEC7Q9Y286 467 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 OTOGQ6ZRI0 2925 aa10.27□□□□□ -0.77
TRAFD1-209ENST00000552896 A0A1W2PPR1 153 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 UNC119BA6NIH7 251 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 TNFRSF11BO00300 401 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 OR10H3O60404 316 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 WNT11O96014 354 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 ACADSP16219 412 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 CDH2P19022 906 aaPredicted RBP10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 CLRN1P58418 232 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 RPL27P61353 136 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 ARF1P84077 181 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 TOP3AQ13472 1001 aaPredicted RBP10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 LAPTM4AQ15012 233 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 HIST3H3Q16695 136 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 HIKESHIQ53FT3 197 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 NCMAPQ5T1S8 102 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 KLHL17Q6TDP4 642 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 ASRGL1Q7L266 308 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 CDH24Q86UP0 819 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 WDR31Q8NA23 367 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF519Q8TB69 540 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 FANK1Q8TC84 345 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 CANT1Q8WVQ1 401 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 BCL2L2Q92843 193 aaPredicted RBP10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 TSPAN32Q96QS1 320 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 TNFRSF13CQ96RJ3 184 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 TMEM204Q9BSN7 226 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 MRPL13Q9BYD1 178 aaKnown RBP10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 YY1AP1Q9H869 796 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 PLEKHF2Q9H8W4 249 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 REEP1Q9H902 201 aa10.26□□□□□ -0.77
TRAFD1-209ENST00000552896 A6NIZ1 184 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 EBAG9O00559 213 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 ENTPD5O75356 428 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 TRMUO75648 421 aaKnown RBP10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 NDUFB2O95178 105 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 CD14P08571 375 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF26P17031 533 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 RPL4P36578 427 aaKnown RBP10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 GSSP48637 474 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF133P52736 654 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 CTXN1P60606 82 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 UBE2NP61088 152 aaKnown RBP10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 RAP1BP61224 184 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 RAP1AP62834 184 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 RUNX1T1Q06455 604 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 BSPH1Q075Z2 132 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF770Q6IQ21 691 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 ALKBH2Q6NS38 261 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 C1orf94Q6P1W5 598 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 PGBD2Q6P3X8 592 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 SMARCD3Q6STE5 483 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 TMEM108Q6UXF1 575 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 PAMR1Q6UXH9 720 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 FAM122BQ7Z309 247 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 ZER1Q7Z7L7 766 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 IGFN1Q86VF2 1251 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 CCDC36Q8IYA8 594 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 FNDC8Q8TC99 324 aa10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 ZNF837Q96EG3 531 aaPredicted RBP10.25□□□□□ -0.77
TRAFD1-209ENST00000552896 GPA33Q99795 319 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms