RNA–Protein interactions for RNA: ENST00000552828.5

CKAP4-202, Transcript of cytoskeleton associated protein 4, humanhuman

TSL 3

Gene CKAP4, Length 831 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP4-202ENST00000552828 CBLL1Q75N03 491 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 LINGO2Q7L985 606 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 GPAT4Q86UL3 456 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 EPHX4Q8IUS5 362 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 RBM15BQ8NDT2 890 aaKnown RBP10.27□□□□□ -0.77
CKAP4-202ENST00000552828 NUP37Q8NFH4 326 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 ADAMTS16Q8TE57 1224 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 HPS1Q92902 700 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 C1orf159Q96HA4 380 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 KCNS3Q9BQ31 491 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 SOX7Q9BT81 388 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 TAPBPLQ9BX59 468 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 LINC00470Q9BZP3 86 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 BPESC1Q9GZL8 116 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 RAB1BQ9H0U4 201 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 PCDHAC1Q9H158 963 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 NELFAQ9H3P2 528 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 ZNF442Q9H7R0 627 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 CD300AQ9UGN4 299 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 EGFL7Q9UHF1 273 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 RPS6KA6Q9UK32 745 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 RASD1Q9Y272 281 aa10.27□□□□□ -0.77
CKAP4-202ENST00000552828 TRAPPC13A5PLN9 417 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 RPL36A-HNRNPH2H7BZ11 118 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 HAX1O00165 279 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 CHP2O43745 196 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 OR2T1O43869 369 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 LILRA1O75019 489 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 UPK3AO75631 287 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 KRT33AO76009 404 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 ZNF432O94892 652 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 STAMBPO95630 424 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 SERPINA1P01009 418 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 TNFRSF1BP20333 461 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 CALCRP30988 508 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 OR1E2P47887 323 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 SH3BGRP55822 239 aaPredicted RBP10.26□□□□□ -0.77
CKAP4-202ENST00000552828 UBE2NP61088 152 aaKnown RBP10.26□□□□□ -0.77
CKAP4-202ENST00000552828 HGFACQ04756 655 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 CARTPTQ16568 116 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 DEF8Q6ZN54 512 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 RINLQ6ZS11 566 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 FKBP9P1Q75LS8 142 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 ARHGAP24Q8N264 748 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 RFLNBQ8N5W9 214 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 FAM156AQ8NDB6 213 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 MFSD8Q8NHS3 518 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 NEU4Q8WWR8 484 aaPredicted RBP10.26□□□□□ -0.77
CKAP4-202ENST00000552828 EPYCQ99645 322 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 DOK1Q99704 481 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 POLR2J2Q9GZM3 115 aaKnown RBP10.26□□□□□ -0.77
CKAP4-202ENST00000552828 POLR2J3Q9H1A7 115 aaKnown RBP10.26□□□□□ -0.77
CKAP4-202ENST00000552828 HEATR1Q9H583 2144 aaKnown RBP10.26□□□□□ -0.77
CKAP4-202ENST00000552828 GORASP2Q9H8Y8 452 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 MAGEL2Q9UJ55 1249 aa10.26□□□□□ -0.77
CKAP4-202ENST00000552828 IGKV1D-42A0A075B6H8 117 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 TRAV36DV7A0A075B6V5 113 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 TMEM129A0AVI4 362 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 FTCDNL1E5RQL4 147 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 FZD7O75084 574 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 UBOX5O94941 541 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 OR5F1O95221 314 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 IFNW1P05000 195 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 DAOP14920 347 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 CBR1P16152 277 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 GTF2E2P29084 291 aaKnown RBP10.25□□□□□ -0.77
CKAP4-202ENST00000552828 IFNA8P32881 189 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 RPS5P46782 204 aaKnown RBP10.25□□□□□ -0.77
CKAP4-202ENST00000552828 CHN2P52757 468 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 TAS2R41P59536 307 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 EGR4Q05215 589 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 RIN1Q13671 783 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 FXNQ16595 210 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 IFI44LQ53G44 452 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 LINC00114Q6XXX2 140 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 VTCN1Q7Z7D3 282 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 ZNF786Q8N393 782 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 GEMIN6Q8WXD5 167 aaKnown RBP10.25□□□□□ -0.77
CKAP4-202ENST00000552828 SLC25A36Q96CQ1 311 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 KTI12Q96EK9 354 aaPredicted RBP10.25□□□□□ -0.77
CKAP4-202ENST00000552828 SLC41A3Q96GZ6 507 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 MPP4Q96JB8 637 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 HSH2DQ96JZ2 352 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 ALKBH3Q96Q83 286 aaPredicted RBP10.25□□□□□ -0.77
CKAP4-202ENST00000552828 TMEM43Q9BTV4 400 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 C1orf21Q9H246 121 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 SEC61A2Q9H9S3 476 aa10.25□□□□□ -0.77
CKAP4-202ENST00000552828 DCAF13Q9NV06 445 aaKnown RBP10.25□□□□□ -0.77
CKAP4-202ENST00000552828 SAMD4AQ9UPU9 718 aaKnown RBP10.25□□□□□ -0.77
CKAP4-202ENST00000552828 A0A096LPE4 126 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 A0A1W2PPZ6 126 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 LRP5LA4QPB2 252 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 VSTM5A8MXK1 200 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 TCF21O43680 179 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 THY1P04216 161 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 IGFBP1P08833 259 aaPredicted RBP10.24□□□□□ -0.77
CKAP4-202ENST00000552828 THRBP10828 461 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 NPR2P20594 1047 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 IL2RGP31785 369 aa10.24□□□□□ -0.77
CKAP4-202ENST00000552828 THBS4P35443 961 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms