RNA–Protein interactions for RNA: ENST00000551981.5

CHMP1A-210, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 2

Gene CHMP1A, Length 689 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-210ENST00000551981 PMS2P3Q13401 168 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 ALKBH6Q3KRA9 238 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 C6orf10Q5SRN2 563 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 AVPI1Q5T686 147 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 MSANTD1Q6ZTZ1 278 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 PIWIL3Q7Z3Z3 882 aaKnown RBP12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 TREML1Q86YW5 311 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 SYNPRQ8TBG9 265 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 RNF217Q8TC41 542 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 SLC47A1Q96FL8 570 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 TIMD4Q96H15 378 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 SSU72Q9NP77 194 aaKnown RBP12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 A4GALTQ9NPC4 353 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 DDX28Q9NUL7 540 aaKnown RBP12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 NKIRAS2Q9NYR9 191 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 PCDHGB1Q9Y5G3 927 aa12.12□□□□□ -0.47
CHMP1A-210ENST00000551981 IGHV1-69-2A0A0G2JMI3 117 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 CLDN25C9JDP6 229 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 TMPRSS2O15393 492 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 TPD52L2O43399 206 aaKnown RBP12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 ADRA2CP18825 462 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 AHCYP23526 432 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 HTR2AP28223 471 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 EPHA3P29320 983 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 UBA52P62987 128 aaKnown RBP12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 ZP4Q12836 540 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 MOGQ16653 247 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 RBMS3Q6XE24 437 aaKnown RBP12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 PXKQ7Z7A4 578 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 ZNF584Q8IVC4 421 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 MIER2Q8N344 545 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 C10orf53Q8N6V4 93 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 ZDHHC22Q8N966 263 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 SLC30A7Q8NEW0 376 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 RAB1CQ92928 201 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 VPS33AQ96AX1 596 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 TXNDC15Q96J42 360 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 C1orf198Q9H425 327 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 CDH20Q9HBT6 801 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 ESM1Q9NQ30 184 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 DECR2Q9NUI1 292 aa12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 MRPL39Q9NYK5 338 aaKnown RBP12.11□□□□□ -0.47
CHMP1A-210ENST00000551981 RGS16O15492 202 aaPredicted RBP12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 DEAF1O75398 565 aaPredicted RBP12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 SERPINI2O75830 405 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 PRSS23O95084 383 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 FARS2O95363 451 aaKnown RBP12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 CLPTM1O96005 669 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 IGHV2-5P01817 119 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 BGLAPP02818 100 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 LCKP06239 509 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 FAM157BP0CG42 384 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 OR8G3PP0DMU2 310 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 ETS2P15036 469 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 ZNF250P15622 560 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 DRD4P21917 467 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 RBBP4Q09028 425 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 FADDQ13158 208 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 RGNQ15493 299 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 HFEQ30201 348 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 GTDC1Q4AE62 458 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 NXNQ6DKJ4 435 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 TMEM53Q6P2H8 277 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 DPPA2Q7Z7J5 298 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 RETREG3Q86VR2 466 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 KRT73Q86Y46 540 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 SKA3Q8IX90 412 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 SLC22A24Q8N4F4 322 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 ZNF519Q8TB69 540 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 C11orf40Q8WZ69 217 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 MAL2Q969L2 176 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 TMEM109Q9BVC6 243 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 SPATA5L1Q9BVQ7 753 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 LRMDAQ9H2I8 198 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 WDR55Q9H6Y2 383 aaPredicted RBP12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 C7orf69Q9H7B7 122 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 TMEM27Q9HBJ8 222 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 ZIM2Q9NZV7 527 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 TESQ9UGI8 421 aaKnown RBP12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 WIPI2Q9Y4P8 454 aa12.1□□□□□ -0.47
CHMP1A-210ENST00000551981 IGLV3-9A0A075B6K5 115 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 PLPP3O14495 311 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 HDAC3O15379 428 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 OR6A2O95222 327 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 PTHP01270 115 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 NUDT7P0C024 238 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 PATE4P0C8F1 98 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 HKR1P10072 659 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 BIDP55957 195 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 BST1Q10588 318 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 TBC1D28Q2M2D7 210 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 KRT71Q3SY84 523 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 DHRS4L2Q6PKH6 230 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 NHLRC1Q6VVB1 395 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 USP51Q70EK9 711 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 OR1J2Q8NGS2 313 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 MOGAT1Q96PD6 335 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 BCL2L14Q9BZR8 327 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 OR51B6Q9H340 312 aa12.09□□□□□ -0.47
CHMP1A-210ENST00000551981 RNF121Q9H920 327 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms