RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 MYH8P13535 1937 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 GOLGA6L7A0A1B0GV03 622 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ARHGEF35A5YM69 484 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 NCF1BA6NI72 391 aaPredicted RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 SAGE2PA6NJ88 616 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ACOD1A6NK06 481 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 NCF1CA8MVU1 366 aaPredicted RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 E9PLD3 99 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 E9PQ18 207 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ERLIN1O75477 346 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 WBP4O75554 376 aaKnown RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 CAPN1P07384 714 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 SMIM10L2AP0DMW4 78 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 SMIM10L2BP0DMW5 78 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 UMPSP11172 480 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ZNF3P17036 446 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 HOXB6P17509 224 aaKnown RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 IMPDH1P20839 514 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ETV5P41161 510 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 RPL34P49207 117 aaKnown RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 CCT3P49368 545 aaKnown RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ST3GAL3Q11203 375 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ELAVL3Q14576 367 aaKnown RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 KCNJ11Q14654 390 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 C17orf58Q2M2W7 97 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 HSDL1Q3SXM5 330 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 TP53I3Q53FA7 332 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 NHLRC3Q5JS37 347 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ZC2HC1BQ5TFG8 222 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ZNF57Q68EA5 555 aaPredicted RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 OR4F3Q6IEY1 312 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 CENPQQ7L2Z9 268 aaPredicted RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 COMTD1Q86VU5 262 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 CSNK1A1LQ8N752 337 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 C15orf54Q8N8G6 183 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ATP6V0D2Q8N8Y2 350 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 FLVCR1-AS1Q8TAF5 88 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 GLT8D2Q9H1C3 349 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 LRRN3Q9H3W5 708 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 RPRD1BQ9NQG5 326 aaKnown RBP4.21□□□□□ -1.74
CPSF6-206ENST00000550987 RAB20Q9NX57 234 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 EHFQ9NZC4 300 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 SENP1Q9P0U3 644 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 PIGLQ9Y2B2 252 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 STK38LQ9Y2H1 464 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 MEMO1Q9Y316 297 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 DNAH1Q9P2D7 4330 aa4.21□□□□□ -1.74
CPSF6-206ENST00000550987 ANK3Q12955 4377 aaKnown RBP4.2□□□□□ -1.74
CPSF6-206ENST00000550987 IGHV3OR16-10A0A075B7F0 116 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 A0A1B0GVL5 298 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 GOLGA8SH3BPF8 625 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 RS1O15537 224 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 TIMM8AO60220 97 aaPredicted RBP4.2□□□□□ -1.74
CPSF6-206ENST00000550987 CACNG3O60359 315 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 UGT2B17O75795 530 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 NOL4O94818 638 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 BCL3P20749 454 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 PRKACBP22694 351 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 PTBP1P26599 531 aaKnown RBP eCLIP4.2□□□□□ -1.744e-9■■■■□ 19.3
CPSF6-206ENST00000550987 RPL13AP40429 203 aaKnown RBP4.2□□□□□ -1.74
CPSF6-206ENST00000550987 P2RY1P47900 373 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 KRTAP10-11P60412 298 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 ERVPABLB-1P60509 514 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 RND3P61587 244 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 VLDLRP98155 873 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 RAB40BQ12829 278 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 LAGE3Q14657 143 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 RCN1Q15293 331 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 KLHL22Q53GT1 634 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 C8orf74Q6P047 294 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 VITQ6UXI7 678 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 TRPM8Q7Z2W7 1104 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 TPRA1Q86W33 373 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 TGIF2LXQ8IUE1 241 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 SLC35F2Q8IXU6 374 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 LINC01561Q8N1V8 128 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 KIR3DL3Q8N743 410 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 CSNK1G2-AS1Q8NCQ2 148 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 OR51G2Q8NGK0 314 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 SCFD1Q8WVM8 642 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 NT5C3BQ969T7 300 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 EFHD2Q96C19 240 aaPredicted RBP4.2□□□□□ -1.74
CPSF6-206ENST00000550987 ZNF707Q96C28 371 aaPredicted RBP4.2□□□□□ -1.74
CPSF6-206ENST00000550987 LRRC39Q96DD0 335 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 MS4A14Q96JA4 679 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 COPS8Q99627 209 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 SIKE1Q9BRV8 207 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 TRIM15Q9C019 465 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 HAUS4Q9H6D7 363 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 METTL7AQ9H8H3 244 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 MCCC2Q9HCC0 563 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 PNO1Q9NRX1 252 aaKnown RBP4.2□□□□□ -1.74
CPSF6-206ENST00000550987 SMOXQ9NWM0 555 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 STYXL1Q9Y6J8 313 aa4.2□□□□□ -1.74
CPSF6-206ENST00000550987 V9GYY5 206 aaPredicted RBP4.2□□□□□ -1.74
CPSF6-206ENST00000550987 MYH4Q9Y623 1939 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 SHANK1Q9Y566 2161 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 PLIN4Q96Q06 1357 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 A0A0J9YWU9 116 aa4.19□□□□□ -1.74
CPSF6-206ENST00000550987 VGLL3A8MV65 326 aa4.19□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms