RNA–Protein interactions for RNA: ENST00000548522.5

SSH1-208, Transcript of slingshot protein phosphatase 1, humanhuman

TSL 3

Gene SSH1, Length 602 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-208ENST00000548522 REV1Q9UBZ9 1251 aa14.15□□□□□ -0.14
SSH1-208ENST00000548522 USP22Q9UPT9 525 aa14.15□□□□□ -0.14
SSH1-208ENST00000548522 SYNGR3O43761 229 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 ENTPD5O75356 428 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 SAGP10523 405 aaPredicted RBP14.14□□□□□ -0.15
SSH1-208ENST00000548522 CD79AP11912 226 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 B4GALT1P15291 398 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 ZNF14P17017 642 aaPredicted RBP14.14□□□□□ -0.15
SSH1-208ENST00000548522 GPR6P46095 362 aaPredicted RBP14.14□□□□□ -0.15
SSH1-208ENST00000548522 C1orf146Q5VVC0 180 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 PIK3C3Q8NEB9 887 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 TMEM186Q96B77 213 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 ZBTB18Q99592 522 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 CALML5Q9NZT1 146 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 SPEF1Q9Y4P9 236 aa14.14□□□□□ -0.15
SSH1-208ENST00000548522 PKD1L1Q8TDX9 2849 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 LOC100653049A0A140TA62 436 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 VSTM5A8MXK1 200 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 AIM2O14862 343 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 KRT34O76011 436 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 MSMBP08118 114 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 ZNF35P13682 527 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 NUDT2P50583 147 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 ACTG1P63261 375 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 POU3F1Q03052 451 aaPredicted RBP14.13□□□□□ -0.15
SSH1-208ENST00000548522 SLC34A1Q06495 639 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 GSG1Q2KHT4 349 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 PDCD4Q53EL6 469 aaKnown RBP14.13□□□□□ -0.15
SSH1-208ENST00000548522 ZNF311Q5JNZ3 666 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 C1orf229Q6ZS94 237 aaPredicted RBP14.13□□□□□ -0.15
SSH1-208ENST00000548522 C20orf196Q8IYI0 205 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 MIER2Q8N344 545 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 OR9I1Q8NGQ6 314 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 ZNF275Q9NSD4 429 aaPredicted RBP14.13□□□□□ -0.15
SSH1-208ENST00000548522 MED29Q9NX70 200 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 ZIM2Q9NZV7 527 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 NDUFAF1Q9Y375 327 aa14.13□□□□□ -0.15
SSH1-208ENST00000548522 A0A0G2JPF8 293 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 A0A1B0GWA3 101 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 HNRNPCL2B2RXH8 293 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 HNRNPCL3B7ZW38 293 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 HNRNPCL4P0DMR1 293 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 GAAP10253 952 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 NAT2P11245 290 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 EGR1P18146 543 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 PCMT1P22061 227 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 GIPRP48546 466 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 PTDSS1P48651 473 aaKnown RBP14.12□□□□□ -0.15
SSH1-208ENST00000548522 LRRC74AQ0VAA2 488 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 MFSD13AQ14CX5 517 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 ALKBH6Q3KRA9 238 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 FAM69AQ5T7M9 428 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 C8orf82Q6P1X6 216 aaPredicted RBP14.12□□□□□ -0.15
SSH1-208ENST00000548522 ZNF813Q6ZN06 617 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 PCYOX1LQ8NBM8 494 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 RCN3Q96D15 328 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 TXNDC15Q96J42 360 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 ZNF232Q9UNY5 417 aa14.12□□□□□ -0.15
SSH1-208ENST00000548522 LOC105371242A0A075B767 164 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 LRRN3E7EW58 273 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 MS4A18H0YCH9 400 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 KCNAB3O43448 404 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 RP2O75695 350 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 ANP32DO95626 131 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 NPPAP01160 153 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 AVPP01185 164 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 PATE4P0C8F1 98 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 ACHEP22303 614 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 EVX1P49640 407 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 LMO4P61968 165 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 RCN1Q15293 331 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 FXNQ16595 210 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 MS4A18Q3C1V0 323 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 ZFP1Q6P2D0 407 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 SHQ1Q6PI26 577 aaKnown RBP14.11□□□□□ -0.15
SSH1-208ENST00000548522 H1FNTQ75WM6 255 aaPredicted RBP14.11□□□□□ -0.15
SSH1-208ENST00000548522 ZNF584Q8IVC4 421 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 UEVLDQ8IX04 471 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 C10orf111Q8N326 155 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 GLB1L3Q8NCI6 653 aaPredicted RBP14.11□□□□□ -0.15
SSH1-208ENST00000548522 IL17RDQ8NFM7 739 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 FGFBP3Q8TAT2 258 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 ZFAND2BQ8WV99 257 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 RDH5Q92781 318 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 HOPXQ9BPY8 73 aaPredicted RBP14.11□□□□□ -0.15
SSH1-208ENST00000548522 POMPQ9Y244 141 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 LRRC42Q9Y546 428 aa14.11□□□□□ -0.15
SSH1-208ENST00000548522 TRAV36DV7A0A075B6V5 113 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 A0A087WUJ7 227 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 A0A0A6YYJ9 748 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 PPIHO43447 177 aaKnown RBP14.1□□□□□ -0.15
SSH1-208ENST00000548522 SLC22A3O75751 556 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 SERPINI2O75830 405 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 IL6P05231 212 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 ZCCHC18P0CG32 403 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 GLRXP35754 106 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 VHLP40337 213 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 MAGEB1P43366 347 aa14.1□□□□□ -0.15
SSH1-208ENST00000548522 COMPP49747 757 aaPredicted RBP14.1□□□□□ -0.15
SSH1-208ENST00000548522 TRAP1Q12931 704 aaKnown RBP14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms