RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 TAS2R10Q9NYW0 307 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 KCNG2Q9UJ96 466 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 V9GY05 133 aa16.74■□□□□ 0.27
PRPF40B-208ENST00000548436 A8MVM7 634 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 XKRYO14609 159 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 YES1P07947 543 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 FOSL2P15408 326 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 SOX2P48431 317 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 RPL27P61353 136 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 STAC2Q6ZMT1 411 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 LRRC69Q6ZNQ3 347 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 GRINAQ7Z429 371 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 OR2G2Q8NGZ5 317 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 ZNF519Q8TB69 540 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 ADAMTS14Q8WXS8 1223 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 SLC25A38Q96DW6 304 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 CMTM3Q96MX0 182 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 NPAS1Q99742 590 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 SRPK3Q9UPE1 567 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 B9D1Q9UPM9 204 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 FREM3P0C091 2139 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 TRBV5-5A0A0J9YX44 114 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 PRSS37A4D1T9 235 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 C2orf72A6NCS6 295 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 OR4C45A6NMZ5 311 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 DXOO77932 396 aaKnown RBP16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 ARRB1P49407 418 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 EGR3Q06889 387 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 COL28A1Q2UY09 1125 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 TIGD3Q6B0B8 471 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 FCRLAQ7L513 359 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 KANSL1Q7Z3B3 1105 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 ANKRD37Q7Z713 158 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 PRSS35Q8N3Z0 413 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 NFAM1Q8NET5 270 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 OR10AC1Q8NH08 325 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 THAP3Q8WTV1 239 aaPredicted RBP16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 MNTQ99583 582 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 SEMA4CQ9C0C4 833 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 AUNIPQ9H7T9 357 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 LIN7BQ9HAP6 207 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 SLCO1C1Q9NYB5 712 aa16.73■□□□□ 0.27
PRPF40B-208ENST00000548436 IGLV3-12A0A075B6K2 115 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 TRAV6A0A075B6T7 132 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 A0A0A6YYJ9 748 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 GSTZ1O43708 216 aaPredicted RBP16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 ANKRD34CP0C6C1 535 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 ADRA2CP18825 462 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 FBXW4P57775 412 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 MRPL28Q13084 256 aaKnown RBP16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 BCL2L15Q5TBC7 163 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 GUSBP11Q6P575 273 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 TSSK4Q6SA08 328 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 BAIAP2L2Q6UXY1 529 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 OTOSQ8NHW6 89 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 NSMAFQ92636 917 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 NUDT15Q9NV35 164 aa16.72■□□□□ 0.27
PRPF40B-208ENST00000548436 CPED1A4D0V7 1026 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 PLPP3O14495 311 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 CTDSPLO15194 276 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 TOX3O15405 576 aaPredicted RBP16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 INSM1Q01101 510 aaPredicted RBP16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 EFR3AQ14156 821 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 Q5BKY6 102 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 BICRALQ6AI39 1079 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 RABEPKQ7Z6M1 372 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 OR51A4Q8NGJ6 313 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 AKAP1Q92667 903 aaKnown RBP eCLIP16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 ATOH1Q92858 354 aaPredicted RBP16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 OR6C1Q96RD1 312 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 DPAGT1Q9H3H5 408 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 TXNIPQ9H3M7 391 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 TCF7L1Q9HCS4 588 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 FKBP7Q9Y680 259 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 TMEM14AQ9Y6G1 99 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 LY6G6EA0A0G2JKS1 128 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 H3BSH0 61 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 ZNF593O00488 134 aaPredicted RBP16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 HLA-DQA2P01906 255 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 IL11P20809 199 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 GIFP27352 417 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 ETFDHQ16134 617 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 ODF4Q2M2E3 257 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 NKAIN1Q4KMZ8 207 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 LRRTM1Q86UE6 522 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 SERPINA12Q8IW75 414 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 ZNF417Q8TAU3 575 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 SMIM4Q8WVI0 70 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 ZNF587Q96SQ5 575 aaPredicted RBP16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 TMEM246Q9BRR3 403 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 MRPL22Q9NWU5 206 aaKnown RBP16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 OR5V1Q9UGF6 321 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 U3KQA8 63 aa16.71■□□□□ 0.27
PRPF40B-208ENST00000548436 A0A1W2PQM1 296 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 SLC16A7O60669 478 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 TCRBP04435 133 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 HEXBP07686 556 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 MAPK3P27361 379 aaPredicted RBP16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 CENPAP49450 140 aa16.7■□□□□ 0.26
PRPF40B-208ENST00000548436 SLC26A5P58743 744 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms