RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 RHCGQ9UBD6 479 aa10.36□□□□□ -0.75
YBX3-217ENST00000546164 FAM32AQ9Y421 112 aaKnown RBP10.36□□□□□ -0.75
YBX3-217ENST00000546164 A0A096LPE4 126 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 A0A1W2PPZ6 126 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 A0A1W2PRG6 482 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 B2RBV5 119 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 E7EQL1 145 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 OVOL3O00110 214 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 ARPC2O15144 300 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 ARHGEF9O43307 516 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 IGHG1P01857 330 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 H1F0P07305 194 aaKnown RBP10.35□□□□□ -0.75
YBX3-217ENST00000546164 SOD3P08294 240 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 PGA4P0DJD7 388 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 PGA3P0DJD8 388 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 T-ENOLP0DO92 83 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 IFI30P13284 250 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 ITGA2P17301 1181 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 MAKP20794 623 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 AQP2P41181 271 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 SLC9A3P48764 834 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 NKX6-1P78426 367 aaPredicted RBP10.35□□□□□ -0.75
YBX3-217ENST00000546164 MXRA7P84157 204 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 VLDLRP98155 873 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 SPOCK1Q08629 439 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 TAF11Q15544 211 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 HIST3H3Q16695 136 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 ARMC4Q5T2S8 1044 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 SLC22A25Q6T423 547 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 ZNF730Q6ZMV8 503 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 TMPRSS11FQ6ZWK6 438 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 DEPDC4Q8N2C3 294 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 MOSPD2Q8NHP6 518 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 SLC7A13Q8TCU3 470 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 ASB10Q8WXI3 467 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 SLC38A2Q96QD8 506 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 KATNB1Q9BVA0 655 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 TMUB1Q9BVT8 246 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 MRPL13Q9BYD1 178 aaKnown RBP10.35□□□□□ -0.75
YBX3-217ENST00000546164 INIPQ9NRY2 104 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 FAIMQ9NVQ4 179 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 LAMP3Q9UQV4 416 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 MED13LQ71F56 2210 aa10.35□□□□□ -0.75
YBX3-217ENST00000546164 IGHV1-18A0A0C4DH31 117 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 IGHMP01871 453 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 F13BP05160 661 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 CBR1P16152 277 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 MSX2P35548 267 aaPredicted RBP10.34□□□□□ -0.75
YBX3-217ENST00000546164 ARR3P36575 388 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 PTH2RP49190 550 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 ZNF133P52736 654 aaPredicted RBP10.34□□□□□ -0.75
YBX3-217ENST00000546164 FHL1Q13642 323 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 MELKQ14680 651 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 NRN1LQ496H8 165 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 ALG10Q5BKT4 473 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 ZNF544Q6NX49 715 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 LRFN4Q6PJG9 635 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 B3GLCTQ6Y288 498 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 ZNF813Q6ZN06 617 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 LRRC75AQ8NAA5 344 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 WFDC11Q8NEX6 87 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 KCTD12Q96CX2 325 aaKnown RBP10.34□□□□□ -0.75
YBX3-217ENST00000546164 NMD3Q96D46 503 aaKnown RBP10.34□□□□□ -0.75
YBX3-217ENST00000546164 FOXB1Q99853 325 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 DHRS9Q9BPW9 319 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 FUZQ9BT04 418 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 TRAF4Q9BUZ4 470 aaPredicted RBP10.34□□□□□ -0.75
YBX3-217ENST00000546164 C1orf21Q9H246 121 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 TXNIPQ9H3M7 391 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 DENND2DQ9H6A0 471 aaPredicted RBP10.34□□□□□ -0.75
YBX3-217ENST00000546164 B3GNT2Q9NY97 397 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 ACTR3BQ9P1U1 418 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 TMEM5Q9Y2B1 443 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 POFUT2Q9Y2G5 429 aa10.34□□□□□ -0.75
YBX3-217ENST00000546164 ZNF503-AS2A6NEH8 195 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 EFCAB9A8MZ26 197 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 MCIDASD6RGH6 385 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 ATP6V1G2-DDX39BF2Z307 99 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 DHHO43323 396 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 ENTPD5O75356 428 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 SEC14L2O76054 403 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 CD8AP01732 235 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 CECR9P0C854 216 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 SAGP10523 405 aaPredicted RBP10.33□□□□□ -0.76
YBX3-217ENST00000546164 ACADSP16219 412 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 TTKP33981 857 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 TUBA1BP68363 451 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 TUBA4AP68366 448 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 NAAAQ02083 359 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 RUNX1T1Q06455 604 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 FOXD4Q12950 439 aaPredicted RBP10.33□□□□□ -0.76
YBX3-217ENST00000546164 LAPTM4AQ15012 233 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 MTX3Q5HYI7 312 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 Q5PR19 223 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 AGAP6Q5VW22 663 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 FAM205BPQ63HN1 556 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 PODNL1Q6PEZ8 512 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 TBPL2Q6SJ96 375 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 TUBA1AQ71U36 451 aa10.33□□□□□ -0.76
YBX3-217ENST00000546164 PIWIL3Q7Z3Z3 882 aaKnown RBP10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms