RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 POLD4Q9HCU8 107 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 HOMER3Q9NSC5 361 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 DCDC2Q9UHG0 476 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 OBSL1O75147 1896 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 MED13LQ71F56 2210 aa2.49□□□□□ -2.01
SNHG1-224ENST00000545688 SCN1AP35498 2009 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 SERPINE3A8MV23 424 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 COCHO43405 550 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 FMO6PO60774 539 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 IGHDP01880 384 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 DLSTP36957 453 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 GNPDA1P46926 289 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 CSNK1DP48730 415 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 CCR6P51684 374 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 SRP54P61011 504 aaKnown RBP2.48□□□□□ -2.01
SNHG1-224ENST00000545688 RPS14P62263 151 aaKnown RBP2.48□□□□□ -2.01
SNHG1-224ENST00000545688 SPAG1Q07617 926 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 SRSF6Q13247 344 aaKnown RBP2.48□□□□□ -2.01
SNHG1-224ENST00000545688 MOBPQ13875 183 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 LY6EQ16553 131 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 TMEM215Q68D42 235 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 KDM7AQ6ZMT4 941 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 C1orf186Q6ZWK4 172 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 CD302Q8IX05 232 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 PDCL2Q8N4E4 241 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 TMEM185AQ8NFB2 350 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 NEK11Q8NG66 645 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 OR2T3Q8NH03 318 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 OR4C6Q8NH72 309 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 PSMA8Q8TAA3 256 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 SLC25A36Q96CQ1 311 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 RNF185Q96GF1 192 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 TMEM121Q9BTD3 319 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 TBC1D10AQ9BXI6 508 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 ASB7Q9H672 318 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 SGK2Q9HBY8 427 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 GDAP2Q9NXN4 497 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 BCAP29Q9UHQ4 241 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 ZNF490Q9ULM2 529 aaPredicted RBP2.48□□□□□ -2.01
SNHG1-224ENST00000545688 SVILO95425 2214 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 TMEM131Q92545 1883 aa2.48□□□□□ -2.01
SNHG1-224ENST00000545688 SDK2Q58EX2 2172 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 ESPL1Q14674 2120 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 STAB1Q9NY15 2570 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 A0A096LNJ9 63 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 LOC100131303A0A0U1RQF7 123 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 ZNF705EA8MWA4 302 aaPredicted RBP2.47□□□□□ -2.01
SNHG1-224ENST00000545688 LAD1O00515 517 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 NVLO15381 856 aaKnown RBP2.47□□□□□ -2.01
SNHG1-224ENST00000545688 CLDN3O15551 220 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 ZBTB14O43829 449 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 HCN1O60741 890 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 HSF2BPO75031 334 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 DEXIO95424 95 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 ZCCHC18P0CG32 403 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 TBPP20226 339 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 CTNNA1P35221 906 aaKnown RBP2.47□□□□□ -2.01
SNHG1-224ENST00000545688 MYBPC1Q00872 1141 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 C17orf67Q0P5P2 114 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 ST3GAL3Q11203 375 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 GGTLC2Q14390 218 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 MORF4L2Q15014 288 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 OR8G2PQ6IF36 304 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 IYDQ6PHW0 289 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 UNQ9370/PRO34162Q6UXP9 181 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 CCDC170Q8IYT3 715 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 IFT74Q96LB3 600 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 XPO6Q96QU8 1125 aaKnown RBP2.47□□□□□ -2.01
SNHG1-224ENST00000545688 NAP1L3Q99457 506 aaPredicted RBP2.47□□□□□ -2.01
SNHG1-224ENST00000545688 TCHPQ9BT92 498 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 PRSS16Q9NQE7 514 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 COMMD8Q9NX08 183 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 TP53TG5Q9Y2B4 290 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 CITO14578 2027 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 TACC2O95359 2948 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 DCHS2Q6V1P9 2916 aa2.47□□□□□ -2.01
SNHG1-224ENST00000545688 ZNF638Q14966 1978 aaKnown RBP2.47□□□□□ -2.01
SNHG1-224ENST00000545688 NBEAL1Q6ZS30 2694 aa2.46□□□□□ -2.01
SNHG1-224ENST00000545688 FN1P02751 2386 aaKnown RBP2.46□□□□□ -2.01
SNHG1-224ENST00000545688 CSPG4Q6UVK1 2322 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 RP1P56715 2156 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 SHANK1Q9Y566 2161 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 IGKV1D-17A0A075B6S4 117 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 VPS37CA5D8V6 355 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 ARHGEF35A5YM69 484 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 F8VP50 259 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 CASC3O15234 703 aaKnown RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 SLC16A4O15374 487 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 HCRTO43612 131 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 MED6O75586 246 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 TNFSF15O95150 251 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 LIPCP11150 499 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 BCKDHAP12694 445 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 TSPAN8P19075 237 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 PRDX3P30048 256 aaKnown RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 UQCRFS1P47985 274 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 ARRB1P49407 418 aaPredicted RBP2.46□□□□□ -2.02
SNHG1-224ENST00000545688 ZNF136P52737 540 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 C21orf59P57076 290 aa2.46□□□□□ -2.02
SNHG1-224ENST00000545688 EIF3IQ13347 325 aaKnown RBP2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms