RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 PIWIL3Q7Z3Z3 882 aaKnown RBP10.3□□□□□ -0.76
HDAC4-216ENST00000544989 PIGWQ7Z7B1 504 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 NKAIN4Q8IVV8 208 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 FNDC8Q8TC99 324 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 TXNDC15Q96J42 360 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 HSH2DQ96JZ2 352 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 FOXB1Q99853 325 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 EMC6Q9BV81 110 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 INIPQ9NRY2 104 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 ADA2Q9NZK5 511 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 TAGLN3Q9UI15 199 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 A4GNTQ9UNA3 340 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 FAM32AQ9Y421 112 aaKnown RBP10.3□□□□□ -0.76
HDAC4-216ENST00000544989 PMF1-BGLAPU3KQ54 211 aa10.3□□□□□ -0.76
HDAC4-216ENST00000544989 IGHV1-18A0A0C4DH31 117 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 SHOX2O60902 331 aaPredicted RBP10.29□□□□□ -0.76
HDAC4-216ENST00000544989 UBL3O95164 117 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 CD8AP01732 235 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 TSPAN19P0C672 248 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 HSD17B1P14061 328 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 ITGA2P17301 1181 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 SLC9A3P48764 834 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 CLRN1P58418 232 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 DSCR9P59020 149 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 NAAAQ02083 359 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 RPL18Q07020 188 aaKnown RBP10.29□□□□□ -0.76
HDAC4-216ENST00000544989 SPOCK1Q08629 439 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 VTCN1Q7Z7D3 282 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 PGAM4Q8N0Y7 254 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 NUP37Q8NFH4 326 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 PFN4Q8NHR9 129 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 ACOT11Q8WXI4 607 aaPredicted RBP10.29□□□□□ -0.76
HDAC4-216ENST00000544989 TMEM54Q969K7 222 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 BPIFA2Q96DR5 249 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 NELFAQ9H3P2 528 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 GORASP2Q9H8Y8 452 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 KRCC1Q9NPI7 259 aaPredicted RBP10.29□□□□□ -0.76
HDAC4-216ENST00000544989 MAGEL2Q9UJ55 1249 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 MOKQ9UQ07 419 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 TMEM5Q9Y2B1 443 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 SPEF1Q9Y4P9 236 aa10.29□□□□□ -0.76
HDAC4-216ENST00000544989 CSPG4Q6UVK1 2322 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 NBEAL1Q6ZS30 2694 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 ATP6V1G2-DDX39BF2Z307 99 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 H7C417 338 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 RAB36O95755 333 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 CECR9P0C854 216 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 PGA4P0DJD7 388 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 PGA3P0DJD8 388 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 OR8G3PP0DMU2 310 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 SAGP10523 405 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-216ENST00000544989 IFI30P13284 250 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 RHCEP18577 417 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 ZNF84P51523 738 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 SMIM11AP58511 58 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 PRKCDQ05655 676 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 KRT72Q14CN4 511 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 RAB35Q15286 201 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 GSG1Q2KHT4 349 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 GKAP1Q5VSY0 366 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-216ENST00000544989 GLYATQ6IB77 296 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 C11orf71Q6IPW1 123 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 ZNF730Q6ZMV8 503 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 LSRQ86X29 649 aaPredicted RBP10.28□□□□□ -0.76
HDAC4-216ENST00000544989 LRRC17Q8N6Y2 441 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 POP5Q969H6 163 aaKnown RBP10.28□□□□□ -0.76
HDAC4-216ENST00000544989 COX4I2Q96KJ9 171 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 C20orf141Q9NUB4 165 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 DCAF13Q9NV06 445 aaKnown RBP10.28□□□□□ -0.76
HDAC4-216ENST00000544989 HIF3AQ9Y2N7 669 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 ENPP4Q9Y6X5 453 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 ATRQ13535 2644 aa10.28□□□□□ -0.76
HDAC4-216ENST00000544989 A0A1W2PRQ8 180 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 A6NIZ1 184 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 DHHO43323 396 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 PTHP01270 115 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 CSF3P09919 207 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 CD79AP11912 226 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 ACADSP16219 412 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 SERPINF1P36955 418 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 CDKN1AP38936 164 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 AQP2P41181 271 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 IDH3GP51553 393 aaPredicted RBP10.27□□□□□ -0.77
HDAC4-216ENST00000544989 GYS2P54840 703 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 RAP1BP61224 184 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 SNRPD2P62316 118 aaKnown RBP10.27□□□□□ -0.77
HDAC4-216ENST00000544989 RAP1AP62834 184 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 MXRA7P84157 204 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 NPRL3Q12980 569 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 DGCR6Q14129 220 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 FXNQ16595 210 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 HIST3H3Q16695 136 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 CLEC12BQ2HXU8 276 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 ALG10Q5BKT4 473 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 PHYHD1Q5SRE7 291 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 B3GLCTQ6Y288 498 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 MBOAT2Q6ZWT7 520 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 OAFQ86UD1 273 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 MDP1Q86V88 176 aa10.27□□□□□ -0.77
HDAC4-216ENST00000544989 NRMQ8IXM6 262 aa10.27□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms