RNA–Protein interactions for RNA: ENST00000544725.5

COPS7A-220, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 5

Gene COPS7A, Length 502 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-220ENST00000544725 CDH20Q9HBT6 801 aa12.39□□□□□ -0.43
COPS7A-220ENST00000544725 UBAP1Q9NZ09 502 aa12.39□□□□□ -0.43
COPS7A-220ENST00000544725 LEF1Q9UJU2 399 aaPredicted RBP12.39□□□□□ -0.43
COPS7A-220ENST00000544725 IFT52Q9Y366 437 aa12.39□□□□□ -0.43
COPS7A-220ENST00000544725 AUP1Q9Y679 476 aa12.39□□□□□ -0.43
COPS7A-220ENST00000544725 CACNG2Q9Y698 323 aa12.39□□□□□ -0.43
COPS7A-220ENST00000544725 TRAV36DV7A0A075B6V5 113 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 MS4A18H0YCH9 400 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 BCHEP06276 602 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 PATE4P0C8F1 98 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 DRD4P21917 467 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 CBLP22681 906 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 CDKN2CP42773 168 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 SLC9A3R2Q15599 337 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 TSTQ16762 297 aaKnown RBP12.38□□□□□ -0.43
COPS7A-220ENST00000544725 MS4A18Q3C1V0 323 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 FAM209AQ5JX71 171 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 SKA3Q8IX90 412 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 BCL6BQ8N143 479 aaPredicted RBP12.38□□□□□ -0.43
COPS7A-220ENST00000544725 MIER2Q8N344 545 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 CCL17Q92583 94 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 SLC35B4Q969S0 331 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 TMIGD2Q96BF3 282 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 OR51B6Q9H340 312 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 C1orf198Q9H425 327 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 TESQ9UGI8 421 aaKnown RBP12.38□□□□□ -0.43
COPS7A-220ENST00000544725 PURGQ9UJV8 347 aaKnown RBP12.38□□□□□ -0.43
COPS7A-220ENST00000544725 CHST2Q9Y4C5 530 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 MMP24Q9Y5R2 645 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 WNK1Q9H4A3 2382 aa12.38□□□□□ -0.43
COPS7A-220ENST00000544725 A0A087WUJ7 227 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 A0A0G2JPF8 293 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 A0A1B0GUS0 222 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 HNRNPCL2B2RXH8 293 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 HNRNPCL3B7ZW38 293 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 HNRNPCL1O60812 293 aaKnown RBP12.37□□□□□ -0.43
COPS7A-220ENST00000544725 HPRP00739 348 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 HNRNPCL4P0DMR1 293 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 MAKP20794 623 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 MTNR1AP48039 350 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 CSNK1A1P48729 337 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 ZNF81P51508 661 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 ERVS71-1P61550 626 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 HOXC5Q00444 222 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 PDCD4Q53EL6 469 aaKnown RBP12.37□□□□□ -0.43
COPS7A-220ENST00000544725 KLF17Q5JT82 389 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-220ENST00000544725 HIST2H2BDQ6DRA6 164 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 SLC22A24Q8N4F4 322 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 SCAIQ8N9R8 606 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 ICA1LQ8NDH6 482 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 CPEB3Q8NE35 698 aaKnown RBP12.37□□□□□ -0.43
COPS7A-220ENST00000544725 OR1J2Q8NGS2 313 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 OR6S1Q8NH40 331 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 TCP10LQ8TDR4 215 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 SLC41A3Q96GZ6 507 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 TXNDC15Q96J42 360 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 C16orf45Q96MC5 204 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-220ENST00000544725 PKP2Q99959 881 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 MRI1Q9BV20 369 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 ASPNQ9BXN1 380 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 BCL2L14Q9BZR8 327 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 MS4A7Q9GZW8 240 aaPredicted RBP12.37□□□□□ -0.43
COPS7A-220ENST00000544725 MMP27Q9H306 513 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 KLHL14Q9P2G3 628 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 GPR45Q9Y5Y3 372 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 ARHGAP32A7KAX9 2087 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 NBEAL2Q6ZNJ1 2754 aa12.37□□□□□ -0.43
COPS7A-220ENST00000544725 TMEM247A6NEH6 219 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 M0QZ24 198 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 SNAP29O95721 258 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 KNG1P01042 644 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 PTHP01270 115 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 IGHV3-13P01766 116 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 IGHMP01871 453 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 BPGMP07738 259 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 MYZAPP0CAP1 466 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 OR8G3PP0DMU2 310 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 CCL2P13500 99 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 ETFAP13804 333 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 LBPP18428 481 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 PCGF2P35227 344 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 CRATP43155 626 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 UCP2P55851 309 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 DSTNP60981 165 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 GLO1Q04760 184 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 PUDPQ08623 228 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 ZNF154Q13106 437 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 PMS2P3Q13401 168 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 TBC1D28Q2M2D7 210 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 RPS26P11Q5JNZ5 115 aaPredicted RBP12.36□□□□□ -0.43
COPS7A-220ENST00000544725 TMEM53Q6P2H8 277 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 C17orf107Q6ZR85 190 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 DPPA2Q7Z7J5 298 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 PAQR4Q8N4S7 273 aaPredicted RBP12.36□□□□□ -0.43
COPS7A-220ENST00000544725 FGFBP3Q8TAT2 258 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 SLC38A5Q8WUX1 472 aa12.36□□□□□ -0.43
COPS7A-220ENST00000544725 DNAJA4Q8WW22 397 aaPredicted RBP12.36□□□□□ -0.43
COPS7A-220ENST00000544725 GTF3AQ92664 365 aaKnown RBP12.36□□□□□ -0.43
COPS7A-220ENST00000544725 TAF15Q92804 592 aaKnown RBP eCLIP12.36□□□□□ -0.43
COPS7A-220ENST00000544725 TMEM19Q96HH6 336 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms