RNA–Protein interactions for RNA: ENST00000544484.5

CHD4-211, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 2 BASIC

Gene CHD4, Length 6,554 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-211ENST00000544484 ZNF454Q8N9F8 522 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 STK35Q8TDR2 534 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 SEMA4CQ9C0C4 833 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 RNF167Q9H6Y7 350 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 P2RX6O15547 441 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 GLCEO94923 617 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 KCNK2O95069 426 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 CEACAM5P06731 702 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 RPL23AP62750 156 aaKnown RBP11.76□□□□□ -0.53
CHD4-211ENST00000544484 PRTGQ2VWP7 1150 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 ADPRMQ3LIE5 342 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 SYT14P1Q58G82 188 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 ZMAT1Q5H9K5 638 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 RNF128Q8TEB7 428 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 ITPKCQ96DU7 683 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 LIN7BQ9HAP6 207 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 RAB9BQ9NP90 201 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 C2CD4DB7Z1M9 353 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 ZNF195O14628 629 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 CHRNB1P11230 501 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 MZT1Q08AG7 82 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 Q6ZS52 159 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 KCTD12Q96CX2 325 aaKnown RBP11.76□□□□□ -0.53
CHD4-211ENST00000544484 CNTNAP3BQ96NU0 1288 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 TEAD3Q99594 435 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 C1QTNF3Q9BXJ4 246 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 WSB2Q9NYS7 404 aaPredicted RBP11.76□□□□□ -0.53
CHD4-211ENST00000544484 CGGBP1Q9UFW8 167 aaPredicted RBP11.76□□□□□ -0.53
CHD4-211ENST00000544484 OR52A1Q9UKL2 312 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 ZNF587BE7ETH6 402 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 FZD6O60353 706 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 PRKACBP22694 351 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 ZNF93P35789 620 aaPredicted RBP11.76□□□□□ -0.53
CHD4-211ENST00000544484 ALDH3B2P48448 385 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 MTNR1BP49286 362 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 AGBL4Q5VU57 503 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 KANSL1Q7Z3B3 1105 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 CMIPQ8IY22 773 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 OR11A1Q9GZK7 315 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 SLA2Q9H6Q3 261 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 M0QYG6 137 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 ARHGAP11BQ3KRB8 267 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 SYT9Q86SS6 491 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 SNX18Q96RF0 628 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 FBXL2Q9UKC9 423 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 OR51B4Q9Y5P0 310 aa11.76□□□□□ -0.53
CHD4-211ENST00000544484 A0A1W2PNR3 127 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 NUPL2O15504 423 aaKnown RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 SRFP11831 508 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 P2RX1P51575 399 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 S100A12P80511 92 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 OTPQ5XKR4 325 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 PAQR6Q6TCH4 344 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 Q6ZTK2 550 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 VASH1Q7L8A9 365 aaPredicted RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 PCDHGA5Q9Y5G8 931 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 KLRC4-KLRK1H3BQV0 150 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 PLRG1O43660 514 aaKnown RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 TPT1P13693 172 aaKnown RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 OMGP23515 440 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 ISL1P61371 349 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 FAM71CQ8NEG0 241 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 SPNS1Q9H2V7 528 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 TMEM100Q9NV29 134 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 GPR160Q9UJ42 338 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 ECM29Q5VYK3 1845 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 ZNF814B7Z6K7 855 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 LILRB5O75023 590 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 CD22P20273 847 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 PSMB1P20618 241 aaKnown RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 TAS2R46P59540 309 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 RBMS2Q15434 407 aaKnown RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 AADACL3Q5VUY0 350 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 TMEM178AQ8NBL3 297 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 GNG12Q9UBI6 72 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 LAMB1P07942 1786 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 TRBV5-4A0A0C4DH59 114 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 A0A1W2PPC4 97 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 PPM1DO15297 605 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 BSGP35613 385 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 ETV1P50549 477 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 B4GALNT1Q00973 533 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 GPR176Q14439 515 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 OR56B4Q8NH76 319 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 KCNG3Q8TAE7 436 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 C1QTNF6Q9BXI9 259 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 FAM155AB1AL88 458 aaPredicted RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 MAGEB4O15481 346 aaPredicted RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 RPS27P42677 84 aaKnown RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 EXT1Q16394 746 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 RTL6Q6ICC9 239 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 PRSS45Q7RTY3 260 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 OR6V1Q8N148 313 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 CLDN22Q8N7P3 220 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 TMEM99Q8N816 258 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 OR2A1Q8NGT9 310 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 PCNPQ8WW12 178 aaKnown RBP11.75□□□□□ -0.53
CHD4-211ENST00000544484 OR2M2Q96R28 347 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 EMC7Q9NPA0 242 aa11.75□□□□□ -0.53
CHD4-211ENST00000544484 ACOXLQ9NUZ1 547 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms