RNA–Protein interactions for RNA: ENST00000544052.6

SCFD1-207, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,058 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-207ENST00000544052 ZNF639Q9UID6 485 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 ZNF107Q9UII5 783 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-207ENST00000544052 UBQLN1Q9UMX0 589 aaKnown RBP2.77□□□□□ -1.97
SCFD1-207ENST00000544052 IFT52Q9Y366 437 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 DNAH14Q0VDD8 3507 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 TSC2P49815 1807 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 DENND4CQ5VZ89 1909 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 OBSL1O75147 1896 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 IGLV8-61A0A075B6I0 122 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 SMCO2A6NFE2 343 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 FAM47DPA6NHR8 397 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 OR52A4PA6NMU1 304 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 CCDC169A6NNP5 214 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 AP2A1O95782 977 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 STSP08842 583 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 ETS2P15036 469 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 IGLL1P15814 213 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 CCR1P32246 355 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 TPMTP51580 245 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 PRR4Q16378 134 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 CLLU1OSQ5K130 101 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 GPRC6AQ5T6X5 926 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 TRPM8Q7Z2W7 1104 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 UBE2J2Q8N2K1 259 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 GPR137CQ8N3F9 429 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 CADM2Q8N3J6 435 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 SVOPLQ8N434 492 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 AGR3Q8TD06 166 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 MAGEE2Q8TD90 523 aaPredicted RBP2.77□□□□□ -1.97
SCFD1-207ENST00000544052 CNOT6LQ96LI5 555 aaKnown RBP2.77□□□□□ -1.97
SCFD1-207ENST00000544052 RNF2Q99496 336 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 FMO2Q99518 471 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 SRXN1Q9BYN0 137 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 DEFB126Q9BYW3 111 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 AZI2Q9H6S1 392 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 PLLPQ9Y342 182 aa2.77□□□□□ -1.97
SCFD1-207ENST00000544052 CFAP54Q96N23 3096 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 FAM240BA0A1B0GVZ2 78 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 CTAGE15A4D2H0 777 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 TUBAL3A6NHL2 446 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 HIDE1A8MVS5 230 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 LOC730098B7Z3J9 87 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 H0Y8G0 127 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 MED7O43513 233 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 BCL2L11O43521 198 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 SLC37A4O43826 429 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 SLITRK3O94933 977 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 TDP2O95551 362 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 CALM1P0DP23 149 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 CALM2P0DP24 149 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 CALM3P0DP25 149 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 HTR1FP30939 366 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 UGT1A3P35503 534 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 MAP3K8P41279 467 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 KIR2DS2P43631 304 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 OR3A4PP47883 348 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 SLC8A3P57103 927 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 DSCR10P59022 87 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 RPL23AP62750 156 aaKnown RBP2.76□□□□□ -1.97
SCFD1-207ENST00000544052 CDK16Q00536 496 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 AANATQ16613 207 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 TMEM31Q5JXX7 168 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 LCE1FQ5T754 118 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 PRAMEF5Q5TYX0 476 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 OR2G6Q5TZ20 316 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 PRAMEF6Q5VXH4 476 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 FRA10AC1Q70Z53 315 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 NIPA1Q7RTP0 329 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 CTAGE6Q86UF2 777 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 PLA2G4DQ86XP0 818 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 CD177Q8N6Q3 437 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 SDR9C7Q8NEX9 313 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 OR6C4Q8NGE1 309 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 OR52H1Q8NGJ2 320 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 OR13F1Q8NGS4 319 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 MRPS31Q92665 395 aaKnown RBP2.76□□□□□ -1.97
SCFD1-207ENST00000544052 UBE2E3Q969T4 207 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 MBOAT7Q96N66 472 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 KLHDC3Q9BQ90 382 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 LZTS2Q9BRK4 669 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 CHRDL1Q9BU40 450 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 SMYD3Q9H7B4 428 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 RGS18Q9NS28 235 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 TMED5Q9Y3A6 229 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 FLVCR1Q9Y5Y0 555 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 COL1A2P08123 1366 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 MYO16Q9Y6X6 1858 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 EML5Q05BV3 1969 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 KIAA1549LQ6ZVL6 1849 aa2.76□□□□□ -1.97
SCFD1-207ENST00000544052 ARPC4-TTLL3A0A0A6YYG9 625 aa2.75□□□□□ -1.97
SCFD1-207ENST00000544052 IGKV6-21A0A0C4DH24 114 aa2.75□□□□□ -1.97
SCFD1-207ENST00000544052 IDSB3KWA1 339 aa2.75□□□□□ -1.97
SCFD1-207ENST00000544052 K7N7A8 449 aa2.75□□□□□ -1.97
SCFD1-207ENST00000544052 ERLIN1O75477 346 aa2.75□□□□□ -1.97
SCFD1-207ENST00000544052 CTDNEP1O95476 244 aa2.75□□□□□ -1.97
SCFD1-207ENST00000544052 RNH1P13489 461 aaKnown RBP2.75□□□□□ -1.97
SCFD1-207ENST00000544052 GCFC2P16383 781 aaKnown RBP2.75□□□□□ -1.97
SCFD1-207ENST00000544052 COX5AP20674 150 aa2.75□□□□□ -1.97
SCFD1-207ENST00000544052 AQP1P29972 269 aa2.75□□□□□ -1.97
SCFD1-207ENST00000544052 YWHABP31946 246 aaKnown RBP2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms