RNA–Protein interactions for RNA: ENST00000543663.5

TUBGCP2-210, Transcript of tubulin gamma complex associated protein 2, humanhuman

TSL 1 (best) BASIC

Gene TUBGCP2, Length 4,302 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP2-210ENST00000543663 HOXC12P31275 282 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 BSGP35613 385 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 EBPQ15125 230 aaKnown RBP11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 ZXDCQ2QGD7 858 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 Q499Y3 187 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 CREB3L2Q70SY1 520 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 COMTD1Q86VU5 262 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 STK35Q8TDR2 534 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 RBPMSQ93062 196 aaKnown RBP11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 BANF2Q9H503 90 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 PCDHGA1Q9Y5H4 931 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 BDP1A6H8Y1 2624 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 A0A0U1RQK1 487 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 PPP2CBP62714 309 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 PPP2CAP67775 309 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 BTG2P78543 158 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 ACY1Q03154 408 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 Q6ZTK2 550 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 ZNF547Q8IVP9 402 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 MFSD9Q8NBP5 474 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 OR52N1Q8NH53 320 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 MRGPRX3Q96LB0 322 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 LDAHQ9H6V9 325 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 WASH6PQ9NQA3 447 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 TRPM7Q96QT4 1865 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 TMEM235A6NFC5 223 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 SERINC4A6NH21 518 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 C1orf196B1AJZ1 125 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 CTNSO60931 367 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 NXPH3O95157 252 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 WISP3O95389 354 aaPredicted RBP11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 S100A11P31949 105 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 CD79BP40259 229 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 CSNK1EP49674 416 aaKnown RBP11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 NPY4RP50391 375 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 C3orf33Q6P1S2 294 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 FAM57BQ71RH2 274 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 ABI3BPQ7Z7G0 1075 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 CCDC190Q86UF4 302 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 PLPP6Q8IY26 295 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 ZNF440Q8IYI8 595 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 SIRT6Q8N6T7 355 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 OR4N2Q8NGD1 307 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 HAVCR2Q8TDQ0 301 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 FGGYQ96C11 551 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 C20orf24Q9BUV8 137 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 C1QTNF6Q9BXI9 259 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 PLA2G2FQ9BZM2 168 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 OR10A5Q9H207 317 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 ICKQ9UPZ9 632 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 SLC22A13Q9Y226 551 aa11.88□□□□□ -0.51
TUBGCP2-210ENST00000543663 SMCO3A2RU48 225 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 DUX1O43812 170 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 CPEP16870 476 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 CDK2P24941 298 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 OTX2P32243 289 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 FASLGP48023 281 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 OR5M1Q8NGP8 315 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 OR6F1Q8NGZ6 308 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 KCTD12Q96CX2 325 aaKnown RBP11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 VRK1Q99986 396 aaPredicted RBP11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 PSD2Q9BQI7 771 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 SLC23A1Q9UHI7 598 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 SLC7A11Q9UPY5 501 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 CAMK2AQ9UQM7 478 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 SULT2B1O00204 365 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 SRPX2O60687 465 aaPredicted RBP11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 MOSPD3O75425 235 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 WDPCPO95876 746 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 PMP2P02689 132 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 EXOSC2Q13868 293 aaKnown RBP11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 WBP2NLQ6ICG8 309 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 CMTM4Q8IZR5 234 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 SLC37A2Q8TED4 501 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 C2CD4CQ8TF44 421 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 APH1BQ8WW43 257 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 FAM3DQ96BQ1 224 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 RADILQ96JH8 1075 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 OR11A1Q9GZK7 315 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 MEPEQ9NQ76 525 aaPredicted RBP11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 IDSB3KWA1 339 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 MAN2B1O00754 1011 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 GPRIN2O60269 458 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 GREM1O60565 184 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 NID1P14543 1247 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 RAB3AP20336 220 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 CCR9P51686 369 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 TAS2R19P59542 299 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 RAE1P78406 368 aaKnown RBP11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 TFF2Q03403 129 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 RBM39Q14498 530 aaKnown RBP11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 UBE2NLQ5JXB2 153 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 SFTPA2Q8IWL1 248 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 OR6V1Q8N148 313 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 TP53I13Q8NBR0 393 aaPredicted RBP11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 ZFAND1Q8TCF1 268 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 SCGB1C1Q8TD33 95 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 GABARAPL1Q9H0R8 117 aa11.87□□□□□ -0.51
TUBGCP2-210ENST00000543663 DAPP1Q9UN19 280 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms