RNA–Protein interactions for RNA: ENST00000543359.5

TNFRSF1A-215, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 627 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-215ENST00000543359 GLTPQ9NZD2 209 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 A4GNTQ9UNA3 340 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PMF1-BGLAPU3KQ54 211 aa11.35□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ELOVL7A1L3X0 281 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 B9A039 149 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 RNF13O43567 381 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 OR6A2O95222 327 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PGA4P0DJD7 388 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 PGA3P0DJD8 388 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 THRBP10828 461 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF35P13682 527 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 B4GALT1P15291 398 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 FUT1P19526 365 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TAS2R41P59536 307 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SELENOWP63302 87 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 LSM11P83369 360 aaKnown RBP eCLIP11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 LOXL1Q08397 574 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF813Q6ZN06 617 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 DEF8Q6ZN54 512 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF584Q8IVC4 421 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SKA3Q8IX90 412 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 IL17RDQ8NFM7 739 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 OR6N1Q8NGY5 312 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 TMEM239Q8WW34 195 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SLC25A44Q96H78 314 aaPredicted RBP11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SORCS2Q96PQ0 1159 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 DOK1Q99704 481 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 FOXB1Q99853 325 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MRPL13Q9BYD1 178 aaKnown RBP11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ULBP2Q9BZM5 246 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ZNF442Q9H7R0 627 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 B3GAT2Q9NPZ5 323 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 ADAM21Q9UKJ8 722 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 POFUT2Q9Y2G5 429 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 SNX13Q9Y5W8 968 aa11.34□□□□□ -0.59
TNFRSF1A-215ENST00000543359 MALRD1Q5VYJ5 2156 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 VWC2LB2RUY7 222 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NME4O00746 187 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 FFAR1O14842 300 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CD5LO43866 347 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 OR7A10O76100 309 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 IFNA14P01570 189 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 BMP4P12644 408 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 AQP2P41181 271 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ZNF133P52736 654 aaPredicted RBP11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 LIPEQ05469 1076 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 RPL18Q07020 188 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PIGFQ07326 219 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NPRL3Q12980 569 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MELKQ14680 651 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HSP90B2PQ58FF3 399 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CLEC2AQ6UVW9 174 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PIWIL3Q7Z3Z3 882 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 VTCN1Q7Z7D3 282 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MOSPD2Q8NHP6 518 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NMD3Q96D46 503 aaKnown RBP11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 KCNS3Q9BQ31 491 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MYLK2Q9H1R3 596 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MAN2C1Q9NTJ4 1040 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TMEM38BQ9NVV0 291 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 AP3M1Q9Y2T2 418 aa11.33□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.32□□□□□ -0.61e-6■■■□□ 17
TNFRSF1A-215ENST00000543359 BLOC1S5-TXNDC5H3BN57 136 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CCDC22O60826 627 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CRLF1O75462 422 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HIST1H2ABP04908 130 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PATE4P0C8F1 98 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CD79AP11912 226 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NPR2P20594 1047 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NR4A1P22736 598 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CAPZA2P47755 286 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 GIPRP48546 466 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SLC7A2P52569 658 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SNRPD2P62316 118 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 RAB1AP62820 205 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 FHL1Q13642 323 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 GSG1Q2KHT4 349 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 LRRC23Q53EV4 343 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ARMC4Q5T2S8 1044 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 VHLLQ6RSH7 139 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HACD2Q6Y1H2 254 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HIST3H2AQ7L7L0 130 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 NANOGNBQ7Z5D8 188 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TSEN54Q7Z6J9 526 aaKnown RBP11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SLC22A24Q8N4F4 322 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ANKS4BQ8N8V4 417 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ASB10Q8WXI3 467 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 FAM168AQ92567 244 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HIST1H2ACQ93077 130 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 MCHR2Q969V1 340 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ZNF566Q969W8 418 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 SGTBQ96EQ0 304 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 TNFRSF13CQ96RJ3 184 aa11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 HOPXQ9BPY8 73 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 DENND2DQ9H6A0 471 aaPredicted RBP11.32□□□□□ -0.6
TNFRSF1A-215ENST00000543359 KIAA1324LA8MWY0 1029 aaPredicted RBP11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 CENPBD1B2RD01 187 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 DHHO43323 396 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 ATP8B1O43520 1251 aa11.31□□□□□ -0.6
TNFRSF1A-215ENST00000543359 PIP5K1CO60331 668 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms