RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 TFP02787 698 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 MRPL3P09001 348 aaKnown RBP11.82□□□□□ -0.52
CHFR-221ENST00000542714 SBK2P0C263 348 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 LIMS3P0CW19 117 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 LIMS4P0CW20 117 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 ZNF24P17028 368 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 DCKP27707 260 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 CD79BP40259 229 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 SLC16A1P53985 500 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 UCNP55089 124 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 LGALS3BPQ08380 585 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 SLC17A1Q14916 467 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 BCL2A1Q16548 175 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 C3AR1Q16581 482 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 SYT6Q5T7P8 510 aaPredicted RBP11.82□□□□□ -0.52
CHFR-221ENST00000542714 LCN1P1Q5VSP4 162 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 CREB3L2Q70SY1 520 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 GPAT4Q86UL3 456 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 ZBTB46Q86UZ6 589 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 SIAH3Q8IW03 269 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 NANOGP1Q8N7R0 232 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 ZIC4Q8N9L1 334 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 OR9K2Q8NGE7 335 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 OR13F1Q8NGS4 319 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 SMAP2Q8WU79 429 aaPredicted RBP11.82□□□□□ -0.52
CHFR-221ENST00000542714 SNRNP27Q8WVK2 155 aaKnown RBP11.82□□□□□ -0.52
CHFR-221ENST00000542714 ZHX1-C8orf76Q96EF9 292 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 OR5M11Q96RB7 305 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 TUBA1CQ9BQE3 449 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 ALG12Q9BV10 488 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 MRPL13Q9BYD1 178 aaKnown RBP11.82□□□□□ -0.52
CHFR-221ENST00000542714 NUAK2Q9H093 628 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 TNFRSF10DQ9UBN6 386 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 LHX6Q9UPM6 363 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 B9D1Q9UPM9 204 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 EXOSC1Q9Y3B2 195 aaKnown RBP11.82□□□□□ -0.52
CHFR-221ENST00000542714 FKBP7Q9Y680 259 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 ZFHX4Q86UP3 3567 aa11.82□□□□□ -0.52
CHFR-221ENST00000542714 PTPRQQ9UMZ3 2332 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 A0A087WV48 116 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 IGKV1D-43A0A0B4J1Z2 117 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 SELENOFO60613 162 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 VAMP5O95183 116 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 GPANK1O95872 356 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 PGA4P0DJD7 388 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 PGA3P0DJD8 388 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 CTLA4P16410 223 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 ZNF43P17038 809 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 SRYQ05066 204 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 FMODQ06828 376 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 POU4F2Q12837 409 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 C1DQ13901 141 aaKnown RBP11.81□□□□□ -0.52
CHFR-221ENST00000542714 PON3Q15166 354 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 PDSS1Q5T2R2 415 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 ZNF367Q7RTV3 350 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 GPR141Q7Z602 305 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 MEIOBQ8N635 442 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 SYT14Q8NB59 555 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 ZNF485Q8NCK3 441 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 PROKR2Q8NFJ6 384 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 OR6K6Q8NGW6 343 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 OR2T4Q8NH00 348 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 OR6X1Q8NH79 312 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 FCGR1BQ92637 280 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 RORBQ92753 470 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 CPNE4Q96A23 557 aaPredicted RBP11.81□□□□□ -0.52
CHFR-221ENST00000542714 ABHD17AQ96GS6 310 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 WDYHV1Q96HA8 205 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 CRELD1Q96HD1 420 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 ZNF385AQ96PM9 386 aaKnown RBP11.81□□□□□ -0.52
CHFR-221ENST00000542714 CNN2Q99439 309 aaKnown RBP11.81□□□□□ -0.52
CHFR-221ENST00000542714 TIMP4Q99727 224 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 SF3B5Q9BWJ5 86 aaKnown RBP11.81□□□□□ -0.52
CHFR-221ENST00000542714 SRA1Q9HD15 236 aaKnown RBP11.81□□□□□ -0.52
CHFR-221ENST00000542714 ERVK13-1Q9NX77 482 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 ING1Q9UK53 422 aaPredicted RBP11.81□□□□□ -0.52
CHFR-221ENST00000542714 MOKQ9UQ07 419 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 TP53TG5Q9Y2B4 290 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 CEPT1Q9Y6K0 416 aa11.81□□□□□ -0.52
CHFR-221ENST00000542714 CELSR3Q9NYQ7 3312 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 A0A1B0GVC2 190 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 SMIM31A0A1B0GVY4 71 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 TMEM129A0AVI4 362 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 MED19A0JLT2 244 aaPredicted RBP11.8□□□□□ -0.52
CHFR-221ENST00000542714 SLC35F4A4IF30 521 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 C12orf71A8MTZ7 269 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 H3BSA7 217 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 CYTIPO60759 359 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 PSKH1P11801 424 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 PSMB9P28065 219 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 NAA10P41227 235 aaPredicted RBP11.8□□□□□ -0.52
CHFR-221ENST00000542714 CLDN17P56750 224 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 CXADRP78310 365 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 CAMK2DQ13557 499 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 ETFDHQ16134 617 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 PLEKHN1Q494U1 663 aaPredicted RBP11.8□□□□□ -0.52
CHFR-221ENST00000542714 PLXDC2Q6UX71 529 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 UNQ6494/PRO21346Q6UXR6 183 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 TIGD4Q8IY51 512 aa11.8□□□□□ -0.52
CHFR-221ENST00000542714 TMEM123Q8N131 208 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms