RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 DLX5P56178 289 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CTBP2P56545 445 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 WNT4P56705 351 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 SLC37A1P57057 533 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CDC42P60953 191 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 RBX1P62877 108 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 VAMP2P63027 116 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 SHC2P98077 582 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 VLDLRP98155 873 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ST3GAL4Q11206 333 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TSPAN31Q12999 210 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 FAM83EQ2M2I3 478 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 SLC25A52Q3SY17 297 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 NKAIN1Q4KMZ8 207 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 C14orf28Q4W4Y0 310 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 NSUN5P2Q63ZY6 315 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CLEC6AQ6EIG7 209 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 KIAA0930Q6ICG6 404 aaPredicted RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 OR6B2Q6IFH4 312 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 SLC30A6Q6NXT4 461 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 LPCAT3Q6P1A2 487 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TMEM88Q6PEY1 159 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 HIST2H3AQ71DI3 136 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ANKRD33Q7Z3H0 272 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 DNAJB7Q7Z6W7 309 aaPredicted RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CYP4Z1Q86W10 505 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 PARGQ86W56 976 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CDK20Q8IZL9 346 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ZNF567Q8N184 647 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 STK40Q8N2I9 435 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CPXM2Q8N436 756 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 LRRC52Q8N7C0 313 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 OR9I1Q8NGQ6 314 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 OR1J4Q8NGS1 313 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CA5BP1Q8WTZ4 195 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 BRI3BPQ8WY22 251 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 HIST1H2BAQ96A08 127 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 PNPLA2Q96AD5 504 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 SENP5Q96HI0 755 aaPredicted RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 SMIM8Q96KF7 97 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 OR4K3Q96R72 315 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 DDOQ99489 341 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TEAD3Q99594 435 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TMEM204Q9BSN7 226 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 THUMPD3Q9BV44 507 aaKnown RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 COMMD4Q9H0A8 199 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CDT1Q9H211 546 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 METTL17Q9H7H0 456 aaPredicted RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 KIR3DX1Q9H7L2 352 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 PTGES2Q9H7Z7 377 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 REEP1Q9H902 201 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 FKRPQ9H9S5 495 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 RPF1Q9H9Y2 349 aaKnown RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 POPDC3Q9HBV1 291 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 NOX3Q9HBY0 568 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TREM1Q9NP99 234 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ADAP2Q9NPF8 381 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ZDHHC4Q9NPG8 344 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 EXOSC3Q9NQT5 275 aaKnown RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 MMP26Q9NRE1 261 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 HEBP1Q9NRV9 189 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 MAN2C1Q9NTJ4 1040 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 ACSS1Q9NUB1 689 aaPredicted RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 CLN6Q9NWW5 311 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 TXNL4BQ9NX01 149 aaKnown RBP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 RPS6KB2Q9UBS0 482 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 GIMAP2Q9UG22 337 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 PCDHGA5Q9Y5G8 931 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 PCDHGA1Q9Y5H4 931 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 PUS1Q9Y606 427 aaKnown RBP eCLIP5.28□□□□□ -1.56
XRCC4-206ENST00000542685 KPTNQ9Y664 436 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 MIA3Q5JRA6 1907 aa5.28□□□□□ -1.56
XRCC4-206ENST00000542685 A0A087WUJ7 227 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 A0A096LPI6 279 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 SYNDIG1LA6NDD5 238 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 ARRDC5A6NEK1 342 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 IQCF5A8MTL0 148 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 CDRT15L2A8MXV6 281 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 B4E171 279 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 DVL1O14640 695 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 TNFRSF13BO14836 293 aaPredicted RBP5.27□□□□□ -1.57
XRCC4-206ENST00000542685 OGG1O15527 345 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 FGF16O43320 207 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 DHHO43323 396 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 GSTZ1O43708 216 aaPredicted RBP5.27□□□□□ -1.57
XRCC4-206ENST00000542685 REM1O75628 298 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 ATP6AP2O75787 350 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 ANXA9O76027 345 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 OR2F2O95006 317 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 NXPH2O95156 264 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 NFATC1O95644 943 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 BCKDHBP21953 392 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 TNFSF4P23510 183 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 C21orf33P30042 268 aaPredicted RBP5.27□□□□□ -1.57
XRCC4-206ENST00000542685 BTCP35070 178 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 ARR3P36575 388 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 FHITP49789 147 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 PPT1P50897 306 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 ZP1P60852 638 aa5.27□□□□□ -1.57
XRCC4-206ENST00000542685 RPS20P60866 119 aaKnown RBP5.27□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms