RNA–Protein interactions for RNA: ENST00000542286.5

DDX55-209, Transcript of DEAD-box helicase 55, humanhuman

TSL 2

Gene DDX55, Length 2,767 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-209ENST00000542286 GIFP27352 417 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 RPL18Q07020 188 aaKnown RBP13.41□□□□□ -0.26
DDX55-209ENST00000542286 PLA2G7Q13093 441 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 ST3GAL2Q16842 350 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 CLVS2Q5SYC1 327 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 FAM69BQ5VUD6 431 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 DPY19L2P2Q6ZN68 376 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 GKN2Q86XP6 184 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 OR51A4Q8NGJ6 313 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 OR2T27Q8NH04 317 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 ZNF671Q8TAW3 534 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 PPP1R14AQ96A00 147 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 SYT4Q9H2B2 425 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 HAO2Q9NYQ3 351 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 KIF25Q9UIL4 384 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 SCP2D1Q9UJQ7 156 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 HRH3Q9Y5N1 445 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 NUBP2Q9Y5Y2 271 aa13.41□□□□□ -0.26
DDX55-209ENST00000542286 TLCD2A6NGC4 264 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 METTL12A8MUP2 240 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 SSNA1O43805 119 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 CDC40O60508 579 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX55-209ENST00000542286 NPR2P20594 1047 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 CD27P26842 260 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 CSF2RBP32927 897 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 GRK6P43250 576 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 NSDHLQ15738 373 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 FNDC7Q5VTL7 733 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 TFAP2EQ6VUC0 442 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 C9orf40Q8IXQ3 194 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 OR14A16Q8NHC5 309 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 UBL7Q96S82 380 aaPredicted RBP13.4□□□□□ -0.26
DDX55-209ENST00000542286 MMP25Q9NPA2 562 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 FSCN3Q9NQT6 498 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 UBQLN4Q9NRR5 601 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 INPP5EQ9NRR6 644 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 CTSFQ9UBX1 484 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 MFSD2BA6NFX1 497 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 ZNF264O43296 627 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 MBTPS2O43462 519 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 DDAH2O95865 285 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 SULT1A3P0DMM9 295 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 SULT1A4P0DMN0 295 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 CENPAP49450 140 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 ARL4DP49703 201 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 ACTC1P68032 377 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 ACTA1P68133 377 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 SLC36A2Q495M3 483 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 MESTQ5EB52 335 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 FAAP20Q6NZ36 180 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 DPY19L4Q7Z388 723 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 SIAH3Q8IW03 269 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 OR6V1Q8N148 313 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 TSPAN32Q96QS1 320 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 OR11A1Q9GZK7 315 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 NKIRAS2Q9NYR9 191 aa13.4□□□□□ -0.26
DDX55-209ENST00000542286 FLRT2O43155 660 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 RPS4XP62701 263 aaKnown RBP13.39□□□□□ -0.27
DDX55-209ENST00000542286 SLC35D2Q76EJ3 337 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 JAZF1Q86VZ6 243 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 PM20D2Q8IYS1 436 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 KCNK15Q9H427 330 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 IKZF2Q9UKS7 526 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 MKL2Q9ULH7 1088 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 SPATA2Q9UM82 520 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 BAIAP2Q9UQB8 552 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 SESN1Q9Y6P5 492 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 H0YC42 278 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 OGG1O15527 345 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 AKR7A3O95154 331 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 LCN1P31025 176 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 ETFDHQ16134 617 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 GSG1Q2KHT4 349 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 HSD17B12Q53GQ0 312 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 NHLRC3Q5JS37 347 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 WBP2NLQ6ICG8 309 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 FAM122BQ7Z309 247 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 TDHQ8IZJ6 230 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 OR6N2Q8NGY6 317 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 ZNF721Q8TF20 911 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 ACOT12Q8WYK0 555 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 NUDT22Q9BRQ3 303 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 CACNG6Q9BXT2 260 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 NMNAT2Q9BZQ4 307 aa13.39□□□□□ -0.27
DDX55-209ENST00000542286 DUSP15Q9H1R2 295 aaPredicted RBP13.39□□□□□ -0.27
DDX55-209ENST00000542286 ATXN7L1Q9ULK2 861 aaPredicted RBP13.39□□□□□ -0.27
DDX55-209ENST00000542286 SLC22A23A1A5C7 686 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 LGALS8O00214 317 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 IL11P20809 199 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 PI4KAP42356 2102 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 DMWDQ09019 674 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDX55-209ENST00000542286 TMEM255AQ5JRV8 349 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 ZNF687Q8N1G0 1237 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 GIMAP1Q8WWP7 306 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 YIPF5Q969M3 257 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 ADAD1Q96M93 576 aaKnown RBP13.38□□□□□ -0.27
DDX55-209ENST00000542286 ZNF285Q96NJ3 590 aa13.38□□□□□ -0.27
DDX55-209ENST00000542286 METTL17Q9H7H0 456 aaPredicted RBP13.38□□□□□ -0.27
DDX55-209ENST00000542286 RXFP3Q9NSD7 469 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms