RNA–Protein interactions for RNA: ENST00000541259.1

DDX55-208, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-208ENST00000541259 PHYHD1Q5SRE7 291 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 TTC23Q5W5X9 447 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 CARD17Q5XLA6 110 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 NIPAL3Q6P499 406 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 B3GNT6Q6ZMB0 384 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 USP51Q70EK9 711 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 ARIH2OSQ8N7S6 290 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 TCEANCQ8N8B7 351 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 CYB561A3Q8NBI2 242 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 SLC37A3Q8NCC5 494 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 NAXEQ8NCW5 288 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 SDR9C7Q8NEX9 313 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 OR52E2Q8NGJ4 325 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 MBD3L2Q8NHZ7 208 aaPredicted RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 FAM81AQ8TBF8 368 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 HDAC2Q92769 488 aaKnown RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 INTS12Q96CB8 462 aaKnown RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 ZNF837Q96EG3 531 aaPredicted RBP8.28□□□□□ -1.08
DDX55-208ENST00000541259 MUS81Q96NY9 551 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 NMNAT3Q96T66 252 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 DDOQ99489 341 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 TTYH2Q9BSA4 534 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 NDEL1Q9GZM8 345 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 FN3KQ9H479 309 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 MED20Q9H944 212 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 BCO1Q9HAY6 547 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 ZNF226Q9NYT6 803 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 KLHL9Q9P2J3 617 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 GPR52Q9Y2T5 361 aa8.28□□□□□ -1.08
DDX55-208ENST00000541259 RELNP78509 3460 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 OR6C68A6NDL8 312 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 NPIPB13A6NJU9 1138 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 FAM183AA6NL82 134 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 ZNF726A6NNF4 738 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 ZNF724A8MTY0 619 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 NPIPB4C9JG80 1138 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 H0YAE9 185 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 TLX2O43763 284 aaPredicted RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 IDH3BO43837 385 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 SS18L1O75177 396 aaPredicted RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 HMGN1P05114 100 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 HOXD4P09016 255 aaPredicted RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 FCGR2AP12318 317 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 APEHP13798 732 aaKnown RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 ACADSP16219 412 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 GNLYP22749 145 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 NOS3P29474 1203 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 AGTR1P30556 359 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 CEACAM8P31997 349 aaPredicted RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 TIMP3P35625 211 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 CA7P43166 264 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 KIR2DL2P43627 348 aaPredicted RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 UQCRFS1P47985 274 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 DAP3P51398 398 aaKnown RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 CDC42P60953 191 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 SIRPAP78324 504 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 ITGADQ13349 1161 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 KEAP1Q14145 624 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 CRMP1Q14194 572 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 SF3B4Q15427 424 aaKnown RBP eCLIP8.27□□□□□ -1.09
DDX55-208ENST00000541259 GUSBP1Q15486 140 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 EIF2S3LQ2VIR3 472 aaKnown RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 ZNF691Q5VV52 312 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 GPR139Q6DWJ6 353 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 GTF2IRD2BQ6EKJ0 949 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 LEG1Q6P5S2 330 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 CASP12Q6UXS9 341 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 AAED1Q7RTV5 226 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 BCDIN3DQ7Z5W3 292 aaKnown RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 GTF2IRD2Q86UP8 949 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 ENTHD1Q8IYW4 607 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 TMEM123Q8N131 208 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 SYT14Q8NB59 555 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 NPEPL1Q8NDH3 523 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 OR6X1Q8NH79 312 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 ZNRF4Q8WWF5 429 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 GMPPAQ96IJ6 420 aaPredicted RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 OR2M2Q96R28 347 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 IL4I1Q96RQ9 567 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 TM9SF2Q99805 663 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 HCAR1Q9BXC0 346 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 C12orf49Q9H741 205 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 CMC2Q9NRP2 79 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 RASSF1Q9NS23 344 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 BAIAP2Q9UQB8 552 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 RNF6Q9Y252 685 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 NOSIPQ9Y314 301 aaKnown RBP8.27□□□□□ -1.09
DDX55-208ENST00000541259 PCDHGB5Q9Y5G0 923 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 CACNA1CQ13936 2221 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 PRR14LQ5THK1 2151 aa8.27□□□□□ -1.09
DDX55-208ENST00000541259 IGKV1D-43A0A0B4J1Z2 117 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 A0A0G2JNJ9 132 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 SLC22A23A1A5C7 686 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 PRSS37A4D1T9 235 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 DCTN6O00399 190 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 GPR171O14626 319 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 UPK3AO75631 287 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 IGHV3-9P01782 118 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 PGA4P0DJD7 388 aa8.26□□□□□ -1.09
DDX55-208ENST00000541259 PGA3P0DJD8 388 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms