RNA–Protein interactions for RNA: ENST00000541102.1

LTBR-209, Transcript of lymphotoxin beta receptor, humanhuman

TSL 5 BASIC

Gene LTBR, Length 1,084 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-209ENST00000541102 WDR31Q8NA23 367 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 POMGNT2Q8NAT1 580 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 ADPRHL1Q8NDY3 354 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 OR9Q2Q8NGE9 314 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 SMAP2Q8WU79 429 aaPredicted RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 LIPHQ8WWY8 451 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 PYDC1Q8WXC3 89 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 DUS3LQ96G46 650 aaKnown RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 TXNDC15Q96J42 360 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 TNFRSF13CQ96RJ3 184 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 ASPNQ9BXN1 380 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 CXorf56Q9H5V9 222 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 DLL4Q9NR61 685 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 CISD1Q9NZ45 108 aaKnown RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 ZNF229Q9UJW7 825 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 CORINQ9Y5Q5 1042 aa12.47□□□□□ -0.41
LTBR-209ENST00000541102 MAGED1Q9Y5V3 778 aaPredicted RBP12.47□□□□□ -0.41
LTBR-209ENST00000541102 EFCAB9A8MZ26 197 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 BLOC1S5-TXNDC5H3BN57 136 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 H3BNX3 289 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 TRAF3IP2O43734 574 aaPredicted RBP12.46□□□□□ -0.41
LTBR-209ENST00000541102 SERPINI2O75830 405 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 F13BP05160 661 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 SOD3P08294 240 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 TSPAN19P0C672 248 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 ADORA3P0DMS8 318 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 FOSL1P15407 271 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 ZNF43P17038 809 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 MPGP29372 298 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 RIPPLY3P57055 190 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 SMIM11AP58511 58 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 FXYD6P3P58550 94 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 RPS4XP62701 263 aaKnown RBP12.46□□□□□ -0.41
LTBR-209ENST00000541102 PUDPQ08623 228 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 MFSD13AQ14CX5 517 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 HIKESHIQ53FT3 197 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 HMBOX1Q6NT76 420 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 PGBD2Q6P3X8 592 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 TMEM108Q6UXF1 575 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 TMPRSS11FQ6ZWK6 438 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 OR51A7Q8NH64 312 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 IGFBPL1Q8WX77 278 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 GTPBP3Q969Y2 492 aaKnown RBP12.46□□□□□ -0.41
LTBR-209ENST00000541102 Q96MF0 132 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 OXGR1Q96P68 337 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 SLC17A5Q9NRA2 495 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 MED29Q9NX70 200 aa12.46□□□□□ -0.41
LTBR-209ENST00000541102 SAMHD1Q9Y3Z3 626 aaKnown RBP12.46□□□□□ -0.41
LTBR-209ENST00000541102 LOC102725191A0A1B0GVB3 256 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 SHISA9B4DS77 424 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 ZNF587BE7ETH6 402 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 ENTPD5O75356 428 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 PTP4A3O75365 173 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 UPK3AO75631 287 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 KRT36O76013 467 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 SAGP10523 405 aaPredicted RBP12.45□□□□□ -0.42
LTBR-209ENST00000541102 AHCYP23526 432 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 CD40P25942 277 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 CDH11P55287 796 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 ATP5J2P56134 94 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 POU3F1Q03052 451 aaPredicted RBP12.45□□□□□ -0.42
LTBR-209ENST00000541102 SLC22A25Q6T423 547 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 KLHL24Q6TFL4 600 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 NANOGNBQ7Z5D8 188 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 ABHD12BQ7Z5M8 362 aaPredicted RBP12.45□□□□□ -0.42
LTBR-209ENST00000541102 AMIGO2Q86SJ2 522 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 IGFN1Q86VF2 1251 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 LRRC75AQ8NAA5 344 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 C1orf162Q8NEQ5 155 aaPredicted RBP12.45□□□□□ -0.42
LTBR-209ENST00000541102 LRTOMTQ8WZ04 291 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 POP5Q969H6 163 aaKnown RBP12.45□□□□□ -0.42
LTBR-209ENST00000541102 C18orf12Q96KH6 178 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 SMR3AQ99954 134 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 EMC6Q9BV81 110 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 GSX2Q9BZM3 304 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 REEP1Q9H902 201 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 ZNF701Q9NV72 531 aaPredicted RBP12.45□□□□□ -0.42
LTBR-209ENST00000541102 ARMC1Q9NVT9 282 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 POU2F3Q9UKI9 436 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 AMDHD2Q9Y303 409 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 AP4S1Q9Y587 144 aa12.45□□□□□ -0.42
LTBR-209ENST00000541102 SMAD7O15105 426 aaKnown RBP12.44□□□□□ -0.42
LTBR-209ENST00000541102 OR10H3O60404 316 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 ZNF432O94892 652 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 GASTP01350 101 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 HIST1H2ABP04908 130 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 IGFBP1P08833 259 aaPredicted RBP12.44□□□□□ -0.42
LTBR-209ENST00000541102 DANCRP0C864 163 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 IFNGR1P15260 489 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 PRKACGP22612 351 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 PTAFRP25105 342 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 GSSP48637 474 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 PRPS1P60891 318 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 SPOCK1Q08629 439 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 ZP4Q12836 540 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 MELKQ14680 651 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 PHYHD1Q5SRE7 291 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 PRSS57Q6UWY2 283 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 THSD4Q6ZMP0 1018 aa12.44□□□□□ -0.42
LTBR-209ENST00000541102 Q71RC1 249 aaPredicted RBP12.44□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms