RNA–Protein interactions for RNA: ENST00000540387.5

CTNNA1-243, Transcript of catenin alpha 1, humanhuman

TSL 1 (best) BASIC

Gene CTNNA1, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-243ENST00000540387 AK6Q9Y3D8 172 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3DA0A087WVF3 549 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3IA0A087WXS9 549 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3EA0A087X179 549 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3KA0A087X1G2 549 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3BA6NDS4 549 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3FA6NER0 549 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 SEC14L6B5MCN3 397 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3LB9A6J9 549 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 MAN2B1O00754 1011 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 SOCS6O14544 535 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 CYTIPO60759 359 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 CRYABP02511 175 aaKnown RBP8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 CD5P06127 495 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 SFTPBP07988 381 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 NPSP0C0P6 89 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 HTR1FP30939 366 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 CD80P33681 288 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 ACSM2AQ08AH3 577 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TMEM115Q12893 351 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 SCGB2B2Q4G0G5 96 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 ACSM2BQ68CK6 577 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3CQ6IPX1 549 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 C1orf94Q6P1W5 598 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 SERPINA13PQ6UXR4 307 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 FAM83HQ6ZRV2 1179 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TBC1D3Q8IZP1 549 aaPredicted RBP8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 ACBD7Q8N6N7 88 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 BEND2Q8NDZ0 799 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 MAFIPQ8WZ33 124 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 GAL3ST3Q96A11 431 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 PIK3IP1Q96FE7 263 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 MRGPRX3Q96LB0 322 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 DERL3Q96Q80 235 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 OR51I1Q9H343 314 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 POT1Q9NUX5 634 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 COMMD9Q9P000 198 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 VPS29Q9UBQ0 182 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 A4GNTQ9UNA3 340 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 VCANP13611 3396 aa8.66□□□□□ -1.02
CTNNA1-243ENST00000540387 TRIOO75962 3097 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 TRAV1-2A0A0B4J238 106 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 J3QRE1 110 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 CRTAPO75718 401 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 TPT1P13693 172 aaKnown RBP8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 RAC2P15153 192 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 IL9P15248 144 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 LPOP22079 712 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 PRKXP51817 358 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 SLBPQ14493 270 aaKnown RBP eCLIP8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 MEF2DQ14814 521 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 KHDC3LQ587J8 217 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 TMEM31Q5JXX7 168 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 IER5LQ5T953 404 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 NKAIN2Q5VXU1 208 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 PTCRAQ6ISU1 281 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 REEP3Q6NUK4 255 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 LRRTM4Q86VH4 590 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 RANBP3LQ86VV4 465 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 TMEM99Q8N816 258 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 TEX19Q8NA77 164 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC30A7Q8NEW0 376 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 STEAP2Q8NFT2 490 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 OR4C16Q8NGL9 310 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 LCN9Q8WX39 176 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 SULT4A1Q9BR01 284 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 APMAPQ9HDC9 416 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 KRCC1Q9NPI7 259 aaPredicted RBP8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 SLC25A13Q9UJS0 675 aa8.65□□□□□ -1.02
CTNNA1-243ENST00000540387 OR52A4PA6NMU1 304 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 FAM157AC9JC47 383 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 ACOT7O00154 380 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 ADAM10O14672 748 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 SMAD9O15198 467 aaKnown RBP8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 THBS1P07996 1170 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 ANXA5P08758 320 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 ANXA4P09525 319 aaPredicted RBP8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 TMEM11P17152 192 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 BMP7P18075 431 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 DGKAP23743 735 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 RAE1P78406 368 aaKnown RBP8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 AIMP2Q13155 320 aaKnown RBP8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 NKPD1Q17RQ9 610 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 ZXDCQ2QGD7 858 aaPredicted RBP8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 MESTQ5EB52 335 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 PDZD11Q5EBL8 140 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 VWA2Q5GFL6 755 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 HENMT1Q5T8I9 393 aaKnown RBP8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 OR2A2Q6IF42 318 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 NRROSQ86YC3 692 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 VRK3Q8IV63 474 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 BAP18Q8IXM2 172 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 SMPDL3BQ92485 455 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 MVB12AQ96EY5 273 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 TMEM208Q9BTX3 173 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 PRDM7Q9NQW5 492 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 LPAR3Q9UBY5 353 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 KPTNQ9Y664 436 aa8.65□□□□□ -1.03
CTNNA1-243ENST00000540387 MGAT4DA6NG13 374 aa8.64□□□□□ -1.03
CTNNA1-243ENST00000540387 F8VVB4 439 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms