RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 UBQLN4Q9NRR5 601 aa12.39□□□□□ -0.43
BNIP3-202ENST00000540159 EFCAB7A8K855 629 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 SHISA8B8ZZ34 492 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 CRYZL1O95825 349 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 POU3F2P20265 443 aaPredicted RBP12.38□□□□□ -0.43
BNIP3-202ENST00000540159 LTBRP36941 435 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 PRPS1P60891 318 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 SNTA1Q13424 505 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 CBFBQ13951 182 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 GRK1Q15835 563 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 SFRP5Q5T4F7 317 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 B3GNTL1Q67FW5 361 aaPredicted RBP12.38□□□□□ -0.43
BNIP3-202ENST00000540159 WBP2NLQ6ICG8 309 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 TMEM205Q6UW68 189 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 OVCH1Q7RTY7 1134 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 FAM122BQ7Z309 247 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 ATG4DQ86TL0 474 aaPredicted RBP12.38□□□□□ -0.43
BNIP3-202ENST00000540159 SLC35F3Q8IY50 421 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 ARHGEF39Q8N4T4 335 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 MMP17Q9ULZ9 603 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 FOXJ3Q9UPW0 622 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 TRAV18A0A075B6X5 111 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 SLC16A7O60669 478 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 PPM1BO75688 479 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 RAF1P04049 648 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 APEHP13798 732 aaKnown RBP12.38□□□□□ -0.43
BNIP3-202ENST00000540159 IGFBP4P22692 258 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 CXCR1P25024 350 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 SDHAP31040 664 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 TAS2R20P59543 309 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 SKP2Q13309 424 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 NSDHLQ15738 373 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 Q499Y3 187 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 TCTE1Q5JU00 501 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 ARHGAP40Q5TG30 622 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 CD276Q5ZPR3 534 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 KIAA0895LQ68EN5 471 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 LANCL3Q6ZV70 420 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF595Q8IYB9 648 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 ZSCAN1Q8NBB4 408 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 OMA1Q96E52 524 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 ELMOD3Q96FG2 381 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF436Q9C0F3 470 aaPredicted RBP12.38□□□□□ -0.43
BNIP3-202ENST00000540159 CLEC4MQ9H2X3 399 aaPredicted RBP12.38□□□□□ -0.43
BNIP3-202ENST00000540159 NARFLQ9H6Q4 476 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 RANBP3Q9H6Z4 567 aaPredicted RBP12.38□□□□□ -0.43
BNIP3-202ENST00000540159 ELOVL3Q9HB03 270 aa12.38□□□□□ -0.43
BNIP3-202ENST00000540159 CGGBP1Q9UFW8 167 aaPredicted RBP12.38□□□□□ -0.43
BNIP3-202ENST00000540159 DCDC2BA2VCK2 349 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 PYCARD-AS1I3L0S3 204 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 HLA-DOBP13765 273 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 LCN1P31025 176 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 ART1P52961 327 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 C2orf68Q2NKX9 166 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF767PQ75MW2 155 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 LIX1LQ8IVB5 337 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 PRSS35Q8N3Z0 413 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 OR5M1Q8NGP8 315 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 OR2G2Q8NGZ5 317 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 METTL21AQ8WXB1 218 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 NMNAT2Q9BZQ4 307 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 HEXA-AS1Q9H8Q6 139 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 POLE3Q9NRF9 147 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 FAM186AA6NE01 2351 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 A0A1B0GVI7 797 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 OR6A2O95222 327 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 CLPSP04118 112 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 CD53P19397 219 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 IL12BP29460 328 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 CAPZBP47756 277 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 SLC37A1P57057 533 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 OR1D5P58170 312 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 WDR38Q5JTN6 314 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 SLC22A10Q63ZE4 541 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 CORO6Q6QEF8 472 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 LINC00346Q8IVM7 164 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 SLITRK2Q9H156 845 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 EMC7Q9NPA0 242 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 TMEM138Q9NPI0 162 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 ZNF224Q9NZL3 707 aa12.37□□□□□ -0.43
BNIP3-202ENST00000540159 CDV3Q9UKY7 258 aaKnown RBP12.37□□□□□ -0.43
BNIP3-202ENST00000540159 PNPP00491 289 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 ARL4DP49703 201 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 RPS4XP62701 263 aaKnown RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 MRPS21P82921 87 aaKnown RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 FUT7Q11130 342 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 FAM69BQ5VUD6 431 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 NDUFAF7Q7L592 441 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 FGD2Q7Z6J4 655 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 SUN5Q8TC36 379 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 NXPE2Q96DL1 559 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 CDCA3Q99618 268 aaPredicted RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 GMEB2Q9UKD1 530 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 OR5K4A6NMS3 321 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 XKRYO14609 159 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 ARPC3O15145 178 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 ARPC5O15511 151 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 SLC25A12O75746 678 aa12.36□□□□□ -0.43
BNIP3-202ENST00000540159 NSA2O95478 260 aaKnown RBP12.36□□□□□ -0.43
BNIP3-202ENST00000540159 ITGA5P08648 1049 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms