RNA–Protein interactions for RNA: ENST00000540060.1

LPCAT3-209, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 4

Gene LPCAT3, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-209ENST00000540060 DNAJB9Q9UBS3 223 aa6.14□□□□□ -1.43
LPCAT3-209ENST00000540060 KCNN3Q9UGI6 736 aa6.14□□□□□ -1.43
LPCAT3-209ENST00000540060 GPR52Q9Y2T5 361 aa6.14□□□□□ -1.43
LPCAT3-209ENST00000540060 POLQO75417 2590 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 RPL36A-HNRNPH2H7BZ11 118 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 PTP4A3O75365 173 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 DEAF1O75398 565 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 RAD51DO75771 328 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 NDUFB2O95178 105 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 BCL10O95999 233 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 IGHG1P01857 330 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 THBDP07204 575 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 PPP3CBP16298 524 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 IL32P24001 234 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 MPGP29372 298 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 IFNGR2P38484 337 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 CSNK1A1P48729 337 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ROR2Q01974 943 aaKnown RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 RUNX1T1Q06455 604 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 TSPAN31Q12999 210 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 TOP3AQ13472 1001 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 TAF11Q15544 211 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ATP6AP1Q15904 470 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 GABRA6Q16445 453 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ZSCAN26Q16670 478 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 HIST3H3Q16695 136 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 MESTQ5EB52 335 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 C9orf135Q5VTT2 229 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 CARD17Q5XLA6 110 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ANKRD34AQ69YU3 496 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 SMARCD3Q6STE5 483 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF620Q6ZNG0 422 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 BHLHA15Q7RTS1 189 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 FAM122BQ7Z309 247 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ABHD12BQ7Z5M8 362 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF295-AS1Q8N0V1 137 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 GPR137CQ8N3F9 429 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 C17orf78Q8N4C9 275 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 AQP11Q8NBQ7 271 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 C1orf162Q8NEQ5 155 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 STEAP2Q8NFT2 490 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 OR10G2Q8NGC3 310 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF519Q8TB69 540 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 GNPDA2Q8TDQ7 276 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 FAM222BQ8WU58 562 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 TMEM54Q969K7 222 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF566Q969W8 418 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF837Q96EG3 531 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 SLC25A44Q96H78 314 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 BOD1Q96IK1 185 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 LRR1Q96L50 414 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 DACH2Q96NX9 599 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 WFIKKN1Q96NZ8 548 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 RAB3IPQ96QF0 476 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 MED18Q9BUE0 208 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 KATNB1Q9BVA0 655 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 HDHD5Q9BXW7 423 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 DGCR6LQ9BY27 220 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 POLDIP3Q9BY77 421 aaKnown RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 MRPL13Q9BYD1 178 aaKnown RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 OR52D1Q9H346 318 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 NELFAQ9H3P2 528 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 DENND2DQ9H6A0 471 aaPredicted RBP6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 NTN4Q9HB63 628 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 CRLF2Q9HC73 371 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 GPR35Q9HC97 309 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 NRIP3Q9NQ35 241 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 NDRG3Q9UGV2 375 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 ADAM18Q9Y3Q7 739 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 AP4S1Q9Y587 144 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 AKAP6Q13023 2319 aa6.13□□□□□ -1.43
LPCAT3-209ENST00000540060 CIB4A0PJX0 185 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 FAM221AA4D161 298 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 OR5H1A6NKK0 313 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 A6NNC1 897 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF726A6NNF4 738 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF99A8MXY4 864 aaPredicted RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CENPBD1B2RD01 187 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 H3BNX3 289 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 M0R3G1 203 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 GNGT2O14610 69 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 SIAH2O43255 324 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 E2F6O75461 281 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 TRMUO75648 421 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 KRT33AO76009 404 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 GASTP01350 101 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 TP53P04637 393 aaPredicted RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CD14P08571 375 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 EPXP11678 715 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 FCGR1AP12314 374 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 PRF1P14222 555 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ACADSP16219 412 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CRYGSP22914 178 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 RPL4P36578 427 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ZNF133P52736 654 aaPredicted RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 SH3BGRP55822 239 aaPredicted RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CLRN1P58418 232 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 CTXN1P60606 82 aa6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 RPL27P61353 136 aaKnown RBP6.12□□□□□ -1.43
LPCAT3-209ENST00000540060 ERVK-25P63136 954 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms