RNA–Protein interactions for RNA: ENST00000540022.5

TNFRSF1A-213, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1A, Length 1,527 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-213ENST00000540022 EMC3Q9P0I2 261 aa16.78■□□□□ 0.28
TNFRSF1A-213ENST00000540022 KLHL21Q9UJP4 597 aa16.78■□□□□ 0.28
TNFRSF1A-213ENST00000540022 A6NIZ1 184 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ZNF726A6NNF4 738 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 XKRYO14609 159 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 DENRO43583 198 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 TLX2O43763 284 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SS18L1O75177 396 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 IFNGP01579 166 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ACADSP16219 412 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 GABRB1P18505 474 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 MYF6P23409 242 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 AGTR1P30556 359 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SELENOPP49908 381 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RAP1BP61224 184 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RAP1AP62834 184 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 IL5RAQ01344 420 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ITGADQ13349 1161 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 GUSBP1Q15486 140 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 EIF2S3LQ2VIR3 472 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 CARD17Q5XLA6 110 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 FAM205BPQ63HN1 556 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 NIPAL3Q6P499 406 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 LEG1Q6P5S2 330 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 AAED1Q7RTV5 226 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 BCDIN3DQ7Z5W3 292 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 JAZF1Q86VZ6 243 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 FAM26EQ8N5C1 309 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SETD9Q8NE22 299 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 OR8J1Q8NGP2 316 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RHOXF1Q8NHV9 184 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 TMEM163Q8TC26 289 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 INTS12Q96CB8 462 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 SLC25A44Q96H78 314 aaPredicted RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 CNBD2Q96M20 576 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 ADAD1Q96M93 576 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 OR2M2Q96R28 347 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 KCNK17Q96T54 332 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 TTYH2Q9BSA4 534 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 HINT3Q9NQE9 182 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 GLRX2Q9NS18 164 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 RCE1Q9Y256 329 aa16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 NOSIPQ9Y314 301 aaKnown RBP16.77■□□□□ 0.28
TNFRSF1A-213ENST00000540022 KIAA1549Q9HCM3 1950 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OR6C68A6NDL8 312 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 FAM183AA6NL82 134 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PGA4P0DJD7 388 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PGA3P0DJD8 388 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ZNF3P17036 446 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 EDNRAP25101 427 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CD47Q08722 323 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MAD2L1BPQ15013 274 aaPredicted RBP16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OR2A2Q6IF42 318 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NUFIP2Q7Z417 695 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ADCK1Q86TW2 530 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TMEM123Q8N131 208 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SYT14Q8NB59 555 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TRUB1Q8WWH5 349 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 HCAR1Q9BXC0 346 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MRPL13Q9BYD1 178 aaKnown RBP16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 FN3KQ9H479 309 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 Q9H521 79 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OSGIN2Q9Y236 505 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 HSPE1-MOB4S4R3N1 261 aa16.76■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TRGV8A0A0C4DH27 118 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PRSS37A4D1T9 235 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 AKAP8O43823 692 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MRPL33O75394 65 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 GLI4P10075 376 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TIMP3P35625 211 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SNRPGP62308 76 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 FOXF2Q12947 444 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TMEM201Q5SNT2 666 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 HDDC2Q7Z4H3 204 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 THAP5Q7Z6K1 395 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CPOQ8IVL8 374 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MARVELD2Q8N4S9 558 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 APH1BQ8WW43 257 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PTP4A1Q93096 173 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 ZNF566Q969W8 418 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SYT4Q9H2B2 425 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 MED20Q9H944 212 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 VSX1Q9NZR4 365 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PCDHGB5Q9Y5G0 923 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 SLC22A23A1A5C7 686 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 IGHG1P01857 330 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CEACAM8P31997 349 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CA7P43166 264 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PER3P56645 1201 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 PLBD1Q6P4A8 553 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NCCRP1Q6ZVX7 275 aaPredicted RBP16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 FAM214BQ7L5A3 538 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CXXC5Q7LFL8 322 aaKnown RBP16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NAXEQ8NCW5 288 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 NOXO1Q8NFA2 376 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 OR9Q1Q8NGQ5 310 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 CNIH3Q8TBE1 160 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 LRR1Q96L50 414 aa16.75■□□□□ 0.27
TNFRSF1A-213ENST00000540022 TSSK2Q96PF2 358 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms