RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ENTPD8Q5MY95 495 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 TMEM53Q6P2H8 277 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 SLC35D2Q76EJ3 337 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 NANOGNBQ7Z5D8 188 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 MYPOPQ86VE0 399 aaPredicted RBP13.21□□□□□ -0.29
UBE3B-211ENST00000539843 COMTD1Q86VU5 262 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 C10orf111Q8N326 155 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 OR6X1Q8NH79 312 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 TSPEARQ8WU66 669 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 TXNDC15Q96J42 360 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 SNX18Q96RF0 628 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 SLC19A3Q9BZV2 496 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 TPK1Q9H3S4 243 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 IKZF5Q9H5V7 419 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 RNF121Q9H920 327 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 B3GNT2Q9NY97 397 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 GLTPQ9NZD2 209 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 ZNF229Q9UJW7 825 aa13.21□□□□□ -0.29
UBE3B-211ENST00000539843 ARFGEF3Q5TH69 2177 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 LRP5LA4QPB2 252 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 TRAPPC13A5PLN9 417 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 ZNF503-AS2A6NEH8 195 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 HMGB1P1B2RPK0 211 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-211ENST00000539843 MCIDASD6RGH6 385 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 CH25HO95992 272 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 OR8G3PP0DMU2 310 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 ZNF14P17017 642 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-211ENST00000539843 ZNF84P51523 738 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 PCBP3P57721 371 aaKnown RBP13.2□□□□□ -0.3
UBE3B-211ENST00000539843 MTPNP58546 118 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 PLP2Q04941 152 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 ZNF74Q16587 644 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 SLC36A2Q495M3 483 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 PHYHD1Q5SRE7 291 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 DLEU7Q6UYE1 221 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 IL17RELQ6ZVW7 336 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 DPP10Q8N608 796 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 VANGL1Q8TAA9 524 aaPredicted RBP13.2□□□□□ -0.3
UBE3B-211ENST00000539843 ADAMTS16Q8TE57 1224 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 SNX33Q8WV41 574 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 MS4A3Q96HJ5 214 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 ARHGDIGQ99819 225 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 SH3GL1Q99961 368 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 KCNN2Q9H2S1 579 aa13.2□□□□□ -0.3
UBE3B-211ENST00000539843 STX18Q9P2W9 335 aaKnown RBP13.2□□□□□ -0.3
UBE3B-211ENST00000539843 LRRN3E7EW58 273 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 HAX1O00165 279 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 KPNA4O00629 521 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 BCL10O95999 233 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 IGHG1P01857 330 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 MT-ND5P03915 603 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 NR2C1P13056 603 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 IFNA8P32881 189 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 PCGF2P35227 344 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 GPR6P46095 362 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 CLRN1P58418 232 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 ZP4Q12836 540 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 CYLC2Q14093 348 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 NPTX1Q15818 432 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 NKPD1Q17RQ9 610 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 RGS7BPQ6MZT1 257 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 ZCCHC24Q8N2G6 241 aaKnown RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 SLC22A24Q8N4F4 322 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 OR6T1Q8NGN1 323 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 OR1J2Q8NGS2 313 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 RDH5Q92781 318 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 SLC25A44Q96H78 314 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 MAGEB18Q96M61 343 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 SYT3Q9BQG1 590 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 MRPL37Q9BZE1 423 aaKnown RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 CDH20Q9HBT6 801 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 SLC52A3Q9NQ40 469 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 ARGLU1Q9NWB6 273 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 DUSP13Q9UII6 198 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 TMEFF2Q9UIK5 374 aaPredicted RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 SLC7A7Q9UM01 511 aa13.19□□□□□ -0.3
UBE3B-211ENST00000539843 ANK3Q12955 4377 aaKnown RBP13.19□□□□□ -0.3
UBE3B-211ENST00000539843 IQCMA0A1B0GVH7 501 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 A0A1W2PRG6 482 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 TMEM129A0AVI4 362 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 B4DSR2 109 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 TCF21O43680 179 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 MGRN1O60291 552 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 TPST2O60704 377 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 IFNA14P01570 189 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 SERPINA5P05154 406 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 ZNF35P13682 527 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 ACHEP22303 614 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 DAP3P51398 398 aaKnown RBP13.18□□□□□ -0.3
UBE3B-211ENST00000539843 RAB39AQ14964 217 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 MOGQ16653 247 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 DUSP7Q16829 419 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 TBC1D28Q2M2D7 210 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 UNQ6126/PRO20091Q6UXV3 157 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 SLC16A14Q7RTX9 510 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 GLCCI1Q86VQ1 547 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 PTOV1Q86YD1 416 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 RFLNBQ8N5W9 214 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 TEX29Q8N6K0 151 aa13.18□□□□□ -0.3
UBE3B-211ENST00000539843 SLC30A7Q8NEW0 376 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms