RNA–Protein interactions for RNA: ENST00000539512.1

TRAV11-201, Transcript of T cell receptor alpha variable 11 (pseudogene), humanhuman

BASIC

Gene TRAV11, Length 339 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV11-201ENST00000539512 OR9K2Q8NGE7 335 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 SRSF12Q8WXF0 261 aaKnown RBP4.27□□□□□ -1.73
TRAV11-201ENST00000539512 EXOSC8Q96B26 276 aaKnown RBP4.27□□□□□ -1.73
TRAV11-201ENST00000539512 TAAR1Q96RJ0 339 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 CDC42EP4Q9H3Q1 356 aaKnown RBP4.27□□□□□ -1.73
TRAV11-201ENST00000539512 SLCO1B3Q9NPD5 702 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 DMAP1Q9NPF5 467 aaPredicted RBP4.27□□□□□ -1.73
TRAV11-201ENST00000539512 NUP50Q9UKX7 468 aa4.27□□□□□ -1.73
TRAV11-201ENST00000539512 ASTN1O14525 1302 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 CROCCQ5TZA2 2017 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 PRRC2AP48634 2157 aaKnown RBP4.26□□□□□ -1.73
TRAV11-201ENST00000539512 CIB4A0PJX0 185 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 DFNA5O60443 496 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 IGHV2-5P01817 119 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 CHMLP26374 656 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 AK4P27144 223 aaPredicted RBP4.26□□□□□ -1.73
TRAV11-201ENST00000539512 ACTA1P68133 377 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 BST1Q10588 318 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 BST2Q10589 180 aaKnown RBP4.26□□□□□ -1.73
TRAV11-201ENST00000539512 TAS2R42Q7RTR8 314 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 TMEM135Q86UB9 458 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 MREGQ8N565 214 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 SPATA4Q8NEY3 305 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 STARD4Q96DR4 205 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 AURKBQ96GD4 344 aaPredicted RBP4.26□□□□□ -1.73
TRAV11-201ENST00000539512 GABARAPL3Q9BY60 117 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 SLC17A9Q9BYT1 436 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 VCXQ9H320 206 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 ETNK2Q9NVF9 386 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 NACADO15069 1562 aa4.26□□□□□ -1.73
TRAV11-201ENST00000539512 ATP10AO60312 1499 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 CHD4Q14839 1912 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 SPAG7O75391 227 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 CIB2O75838 187 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 C1orf105O95561 183 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 RPS2P15880 293 aaKnown RBP4.25□□□□□ -1.73
TRAV11-201ENST00000539512 RGS19P49795 217 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 CCR8P51685 355 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 ACTRT1Q8TDG2 376 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 CD300LFQ8TDQ1 290 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 PIBF1Q8WXW3 757 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 CEP170P1Q96L14 293 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 PLIN2Q99541 437 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 SH3GL3Q99963 347 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 DNTTIP1Q9H147 329 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 IFI27L2Q9H2X8 130 aa4.25□□□□□ -1.73
TRAV11-201ENST00000539512 PSMC3IPQ9P2W1 217 aaPredicted RBP4.25□□□□□ -1.73
TRAV11-201ENST00000539512 IGLV4-69A0A075B6H9 119 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 IGLV11-55A0A075B6I3 123 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.24□□□□□ -1.73
TRAV11-201ENST00000539512 WBP4O75554 376 aaKnown RBP4.24□□□□□ -1.73
TRAV11-201ENST00000539512 BGLAPP02818 100 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 ZDHHC11BP0C7U3 371 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 SMIM10L1P0DMW3 83 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 IGHV3-43DP0DP04 118 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 TROVE2P10155 538 aaKnown RBP eCLIP4.24□□□□□ -1.73
TRAV11-201ENST00000539512 PPOXP50336 477 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 RORCP51449 518 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 FGF8P55075 233 aaPredicted RBP4.24□□□□□ -1.73
TRAV11-201ENST00000539512 HMGCS1Q01581 520 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 PPIL2Q13356 520 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 GUCA2BQ16661 112 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 TMEM179Q6ZVK1 233 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 LHFPL3Q86UP9 236 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 RHEBL1Q8TAI7 183 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 SLC22A8Q8TCC7 542 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 SMIM10Q96HG1 83 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 TSSK3Q96PN8 268 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 PLA2G2FQ9BZM2 168 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 METTL7AQ9H8H3 244 aa4.24□□□□□ -1.73
TRAV11-201ENST00000539512 NFASCO94856 1347 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 A0A1W2PPE3 182 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 C11orf94C9JXX5 98 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 SS18L1O75177 396 aaPredicted RBP4.23□□□□□ -1.73
TRAV11-201ENST00000539512 EIF3GO75821 320 aaKnown RBP eCLIP4.23□□□□□ -1.73
TRAV11-201ENST00000539512 ZNF30P17039 623 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 KITLGP21583 273 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 PLP1P60201 277 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 YWHAGP61981 247 aaKnown RBP eCLIP4.23□□□□□ -1.73
TRAV11-201ENST00000539512 MRPS22P82650 360 aaKnown RBP4.23□□□□□ -1.73
TRAV11-201ENST00000539512 ZNF92Q03936 586 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 TCP10Q12799 353 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 EIF4EBP2Q13542 120 aaPredicted RBP4.23□□□□□ -1.73
TRAV11-201ENST00000539512 TTLL9Q3SXZ7 439 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 OR52W1Q6IF63 320 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 RNASEKQ6P5S7 137 aaKnown RBP4.23□□□□□ -1.73
TRAV11-201ENST00000539512 TMEM107Q6UX40 140 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 EID2Q8N6I1 236 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 AKR7LQ8NHP1 331 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 KCNG3Q8TAE7 436 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 CXorf40AQ8TE69 158 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 TUBGCP3Q96CW5 907 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 FOPNLQ96NB1 174 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 OR12D3Q9UGF7 316 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 UNC13AQ9UPW8 1703 aa4.23□□□□□ -1.73
TRAV11-201ENST00000539512 COL16A1Q07092 1604 aaPredicted RBP4.22□□□□□ -1.73
TRAV11-201ENST00000539512 A0A1W2PPV9 198 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 FAM47DPA6NHR8 397 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 MED6O75586 246 aa4.22□□□□□ -1.73
TRAV11-201ENST00000539512 ZNF32P17041 273 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms