RNA–Protein interactions for RNA: ENST00000539148.3

CLPB-210, Transcript of ClpB homolog, mitochondrial AAA ATPase chaperonin, humanhuman

TSL 5

Gene CLPB, Length 564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPB-210ENST00000539148 TMIGD2Q96BF3 282 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 INTS12Q96CB8 462 aaKnown RBP9.14□□□□□ -0.95
CLPB-210ENST00000539148 LRRC46Q96FV0 321 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 COG8Q96MW5 612 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 SIGLEC11Q96RL6 698 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 GPX7Q96SL4 187 aaPredicted RBP9.14□□□□□ -0.95
CLPB-210ENST00000539148 SH3GL3Q99963 347 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 NIPSNAP1Q9BPW8 284 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 VKORC1Q9BQB6 163 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 IFT27Q9BW83 186 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 OR52D1Q9H346 318 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 SIAEQ9HAT2 523 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 ACOT13Q9NPJ3 140 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 B3GAT2Q9NPZ5 323 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 SEC14L4Q9UDX3 406 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 ENPP5Q9UJA9 477 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 RCE1Q9Y256 329 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 A3GALT2U3KPV4 340 aa9.14□□□□□ -0.95
CLPB-210ENST00000539148 ESPL1Q14674 2120 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 IGKV3D-15A0A087WSY6 115 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 TRAV27A0A087WT01 109 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 TRGV8A0A0C4DH27 118 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 MBD3L4A6NDZ8 208 aaPredicted RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 MBD3L3A6NE82 208 aaPredicted RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 MBD3L5A6NJ08 208 aaPredicted RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 RIIAD1A6NNX1 92 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 C11orf98E9PRG8 122 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 CDC42EP2O14613 210 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 ARPC3O15145 178 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 SMAD9O15198 467 aaKnown RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 PTP4A3O75365 173 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 MRPL33O75394 65 aaKnown RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 GABARAPO95166 117 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 TSPAN19P0C672 248 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 PTNP21246 168 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 POU1F1P28069 291 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 FMO3P31513 532 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 GUCA1AP43080 201 aaPredicted RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 GIPRP48546 466 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 CTXN1P60606 82 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 POU3F1Q03052 451 aaPredicted RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 TLE1Q04724 770 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 ITGADQ13349 1161 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 DCTN2Q13561 401 aaKnown RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 SLC17A1Q14916 467 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 PRR30Q53SZ7 412 aaPredicted RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 ARMC4Q5T2S8 1044 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 RIPPLY2Q5TAB7 128 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 ABLIM2Q6H8Q1 611 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 LAIR2Q6ISS4 152 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 DNM1P34Q6PK57 102 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 ADGRE4PQ86SQ3 457 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 P2RY8Q86VZ1 359 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 JAZF1Q86VZ6 243 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 MBD3L2Q8NHZ7 208 aaPredicted RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 FNDC9Q8TBE3 224 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 S100ZQ8WXG8 99 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 RND1Q92730 232 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 TNFRSF13CQ96RJ3 184 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 TSSK6Q9BXA6 273 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 TXNIPQ9H3M7 391 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 RASSF1Q9NS23 344 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 CHCHD3Q9NX63 227 aaKnown RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 COQ3Q9NZJ6 369 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 KLHL13Q9P2N7 655 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 CLCF1Q9UBD9 225 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 REV1Q9UBZ9 1251 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 KLHL21Q9UJP4 597 aa9.13□□□□□ -0.95
CLPB-210ENST00000539148 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.13□□□□□ -0.95
CLPB-210ENST00000539148 NOSIPQ9Y314 301 aaKnown RBP9.13□□□□□ -0.95
CLPB-210ENST00000539148 XPNPEP2O43895 674 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 SLC43A1O75387 559 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 KRT33AO76009 404 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 CNOT4O95628 575 aaKnown RBP9.12□□□□□ -0.95
CLPB-210ENST00000539148 RENP00797 406 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 IGHG1P01857 330 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 IGHMP01871 453 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 STSP08842 583 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 HTR1AP08908 422 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 ZNF3P17036 446 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 SDHAP31040 664 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 GRK5P34947 590 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 OPRM1P35372 400 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 AQP2P41181 271 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 CA7P43166 264 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 CENPAP49450 140 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 PCYT1AP49585 367 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 RPL27P61353 136 aaKnown RBP9.12□□□□□ -0.95
CLPB-210ENST00000539148 CDK5Q00535 292 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 LTBQ06643 244 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 MOGQ16653 247 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 DGUOKQ16854 277 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 CREB3L2Q70SY1 520 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 AHSA2Q719I0 299 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 SLC35D2Q76EJ3 337 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 AAED1Q7RTV5 226 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 DOLPP1Q86YN1 238 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 ZNF100Q8IYN0 542 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 LNX2Q8N448 690 aa9.12□□□□□ -0.95
CLPB-210ENST00000539148 LRRC17Q8N6Y2 441 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms