RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 MAMDC2Q7Z304 686 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-204ENST00000538492 NUP54Q7Z3B4 507 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 ZNF676Q8N7Q3 588 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 OR2G2Q8NGZ5 317 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 OR11A1Q9GZK7 315 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 C7orf66A4D0T2 115 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 MAS1P04201 325 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 PTHLHP12272 177 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 TNK1Q13470 666 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 ACKR1Q16570 336 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 SLC35D2Q76EJ3 337 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 SYNPRQ8TBG9 265 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 DUSP19Q8WTR2 217 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 ATOH1Q92858 354 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-204ENST00000538492 ZNF501Q96CX3 271 aaPredicted RBP22.51■■□□□ 1.19
RAB40C-204ENST00000538492 SLITRK2Q9H156 845 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 SLCO1C1Q9NYB5 712 aa22.51■■□□□ 1.19
RAB40C-204ENST00000538492 TMED7-TICAM2A0A0A6YYA0 188 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 CTDSPLO15194 276 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 SYPP08247 313 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 PNLIPRP2P54317 469 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 RPS15P62841 145 aaKnown RBP22.5■■□□□ 1.19
RAB40C-204ENST00000538492 BEST4Q8NFU0 473 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 OR11H7Q8NGC8 314 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 BEX1Q9HBH7 125 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 ZNF222Q9UK12 451 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 RCE1Q9Y256 329 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 TMED7Q9Y3B3 224 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 OR4C45A6NMZ5 311 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 BCAT2O15382 392 aaPredicted RBP22.5■■□□□ 1.19
RAB40C-204ENST00000538492 FABP7O15540 132 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 STOMP27105 288 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 PRSS35Q8N3Z0 413 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 OR52I2Q8NH67 350 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 CCDC74AQ96AQ1 378 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 DACT3Q96B18 629 aaPredicted RBP22.5■■□□□ 1.19
RAB40C-204ENST00000538492 CMTM3Q96MX0 182 aa22.5■■□□□ 1.19
RAB40C-204ENST00000538492 GTPBP2Q9BX10 602 aaKnown RBP22.5■■□□□ 1.19
RAB40C-204ENST00000538492 TRAV8-7A0A075B6U6 113 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 C2orf72A6NCS6 295 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 MAPK3P27361 379 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-204ENST00000538492 LCN1P31025 176 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 AFF3P51826 1226 aaKnown RBP22.49■■□□□ 1.19
RAB40C-204ENST00000538492 SFRP4Q6FHJ7 346 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-204ENST00000538492 PWWP2BQ6NUJ5 590 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 LRRN1Q6UXK5 716 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 ADGRG3Q86Y34 549 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 THAP3Q8WTV1 239 aaPredicted RBP22.49■■□□□ 1.19
RAB40C-204ENST00000538492 TMEM106AQ96A25 262 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 NKIRAS2Q9NYR9 191 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 HSPB11Q9Y547 144 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 GIMD1P0DJR0 217 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 P2RX1P51575 399 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 FAM69AQ5T7M9 428 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 TMPRSS12Q86WS5 348 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 CARFQ8N187 725 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 DEDD2Q8WXF8 326 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 OR51J1Q9H342 316 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 KLK11Q9UBX7 282 aa22.49■■□□□ 1.19
RAB40C-204ENST00000538492 TRBV5-5A0A0J9YX44 114 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 ZNF593O00488 134 aaPredicted RBP22.48■■□□□ 1.19
RAB40C-204ENST00000538492 FADS1O60427 444 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 POLR2HP52434 150 aaKnown RBP22.48■■□□□ 1.19
RAB40C-204ENST00000538492 EGR3Q06889 387 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 ETFDHQ16134 617 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 SGCBQ16585 318 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 SLC22A10Q63ZE4 541 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 LAMTOR1Q6IAA8 161 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 SIX5Q8N196 739 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 ZNF441Q8N8Z8 693 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 SLC7A5P2Q9GIP4 190 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 COMMD4Q9H0A8 199 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 COPZ2Q9P299 210 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 GMDSO60547 372 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 SLC16A7O60669 478 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 H2AFB2P0C5Z0 115 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 CXCL3P19876 107 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 GPLD1P80108 840 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 TMEM255AQ5JRV8 349 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 C1orf140Q5VVS0 124 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 LRRTM1Q86UE6 522 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 PLCZ1Q86YW0 608 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 OTOSQ8NHW6 89 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 GPR119Q8TDV5 335 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 S100A16Q96FQ6 103 aaKnown RBP22.48■■□□□ 1.19
RAB40C-204ENST00000538492 MS4A3Q96HJ5 214 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 B9D1Q9UPM9 204 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 TMEM14AQ9Y6G1 99 aa22.48■■□□□ 1.19
RAB40C-204ENST00000538492 PRSS37A4D1T9 235 aa22.47■■□□□ 1.19
RAB40C-204ENST00000538492 H0YC42 278 aa22.47■■□□□ 1.19
RAB40C-204ENST00000538492 ZNF780AO75290 641 aaPredicted RBP22.47■■□□□ 1.19
RAB40C-204ENST00000538492 POU3F3P20264 500 aaPredicted RBP22.47■■□□□ 1.19
RAB40C-204ENST00000538492 RPL27P61353 136 aaKnown RBP22.47■■□□□ 1.19
RAB40C-204ENST00000538492 TMEM69Q5SWH9 247 aa22.47■■□□□ 1.19
RAB40C-204ENST00000538492 KDM8Q8N371 416 aa22.47■■□□□ 1.19
RAB40C-204ENST00000538492 GIMAP1Q8WWP7 306 aa22.47■■□□□ 1.19
RAB40C-204ENST00000538492 SLC22A11Q9NSA0 550 aa22.47■■□□□ 1.19
RAB40C-204ENST00000538492 ATXN7L1Q9ULK2 861 aaPredicted RBP22.47■■□□□ 1.19
RAB40C-204ENST00000538492 ASCC3Q8N3C0 2202 aaKnown RBP22.47■■□□□ 1.19
RAB40C-204ENST00000538492 RAD1O60671 282 aa22.47■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms