RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 TMEM229AB2RXF0 380 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 TNFRSF13BO14836 293 aaPredicted RBP7.7□□□□□ -1.18
USP28-205ENST00000537706 ZNF208O43345 1280 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 DNAJA2O60884 412 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 UBTFL6P0CB48 400 aaPredicted RBP7.7□□□□□ -1.18
USP28-205ENST00000537706 KITP10721 976 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 MAKP20794 623 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 GABRA5P31644 462 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 ARRB2P32121 409 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 TGFBR2P37173 567 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 ZNF81P51508 661 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 CAMK2DQ13557 499 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 PDZK1Q5T2W1 519 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 SNX32Q86XE0 403 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 TMEM151AQ8N4L1 468 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 GATAD2BQ8WXI9 593 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 UTP4Q969X6 686 aaKnown RBP7.7□□□□□ -1.18
USP28-205ENST00000537706 ZNF524Q96C55 264 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 APIPQ96GX9 242 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 NSL1Q96IY1 281 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 GPR78Q96P69 363 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 SSBP3Q9BWW4 388 aaPredicted RBP7.7□□□□□ -1.18
USP28-205ENST00000537706 TRIM15Q9C019 465 aa7.7□□□□□ -1.18
USP28-205ENST00000537706 MRPL46Q9H2W6 279 aaKnown RBP7.7□□□□□ -1.18
USP28-205ENST00000537706 TENM3Q9P273 2699 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 WNK2Q9Y3S1 2297 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 TMED7-TICAM2A0A0A6YYA0 188 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 PLSCR5A0PG75 271 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 ANKRD61A6NGH8 418 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 AQP7P3A6NL99 342 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 AKAP8O43823 692 aaKnown RBP7.69□□□□□ -1.18
USP28-205ENST00000537706 SCN2BO60939 215 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 IGHV2-70P01814 119 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 LCKP06239 509 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 SBK3P0C264 359 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 IMPDH2P12268 514 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 SERPINB5P36952 375 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 PRSS53Q2L4Q9 553 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 CEACAM16Q2WEN9 425 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 NSUN5P1Q3KNT7 163 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 LETMD1Q6P1Q0 360 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 MAVSQ7Z434 540 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 MUC20Q8N307 709 aaPredicted RBP7.69□□□□□ -1.18
USP28-205ENST00000537706 POU5F2Q8N7G0 328 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 ZNF519Q8TB69 540 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 DPF1Q92782 380 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 R3HDM4Q96D70 268 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 ZG16BQ96DA0 208 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 NSUN5Q96P11 429 aaKnown RBP7.69□□□□□ -1.18
USP28-205ENST00000537706 MRPL57Q9BQC6 102 aaKnown RBP7.69□□□□□ -1.18
USP28-205ENST00000537706 EBF4Q9BQW3 602 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 GPR35Q9HC97 309 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 SIRT5Q9NXA8 310 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 RASD1Q9Y272 281 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 SLC35A3Q9Y2D2 325 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 STK38LQ9Y2H1 464 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 TMED7Q9Y3B3 224 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 RYR2Q92736 4967 aa7.69□□□□□ -1.18
USP28-205ENST00000537706 IGLV3-9A0A075B6K5 115 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 OR4F21O95013 312 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 AKR7A3O95154 331 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 CLPTM1O96005 669 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 RBP1P09455 135 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 OR8G3PP0DMU2 310 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 LYL1P12980 280 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 ZNF250P15622 560 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 ZNF14P17017 642 aaPredicted RBP7.68□□□□□ -1.18
USP28-205ENST00000537706 POLR2HP52434 150 aaKnown RBP7.68□□□□□ -1.18
USP28-205ENST00000537706 PCBP3P57721 371 aaKnown RBP7.68□□□□□ -1.18
USP28-205ENST00000537706 TP53BP2Q13625 1128 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 OR7A5Q15622 319 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 CREB3L2Q70SY1 520 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 LINGO2Q7L985 606 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 PTOV1Q86YD1 416 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 TMEM99Q8N816 258 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 DTX3Q8N9I9 347 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 MS4A3Q96HJ5 214 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 BTBD10Q9BSF8 475 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 ACPTQ9BZG2 426 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 MMADHCQ9H3L0 296 aaPredicted RBP7.68□□□□□ -1.18
USP28-205ENST00000537706 CDH20Q9HBT6 801 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 B3GAT2Q9NPZ5 323 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 CYSLTR2Q9NS75 346 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 ZCCHC3Q9NUD5 404 aaKnown RBP7.68□□□□□ -1.18
USP28-205ENST00000537706 PNPOQ9NVS9 261 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 FBLN5Q9UBX5 448 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 RAP2CQ9Y3L5 183 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 ZNF99A8MXY4 864 aaPredicted RBP7.68□□□□□ -1.18
USP28-205ENST00000537706 F5H0A9 414 aaPredicted RBP7.68□□□□□ -1.18
USP28-205ENST00000537706 NPIPB9F8W1W9 429 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 P2RY10O00398 339 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 SPRY3O43610 288 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 NPHS1O60500 1241 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 ENTPD5O75356 428 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 ZFPL1O95159 310 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 UBL3O95164 117 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 IGHV4-59P01825 116 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 HLA-HP01893 362 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 UROSP10746 265 aa7.68□□□□□ -1.18
USP28-205ENST00000537706 RYKP34925 604 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms