RNA–Protein interactions for RNA: ENST00000537047.5

CCDC7-208, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 657 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-208ENST00000537047 CD34P28906 385 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 GINS1Q14691 196 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 NADK2Q4G0N4 442 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 TRIM69Q86WT6 500 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 RNF157Q96PX1 679 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 OSBPL11Q9BXB4 747 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 RPP21Q9H633 154 aaKnown RBP2.03□□□□□ -2.08
CCDC7-208ENST00000537047 LY9Q9HBG7 655 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 PALMDQ9NP74 551 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 ZNF355PQ9NSJ1 428 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 HPF1Q9NWY4 346 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 F11RQ9Y624 299 aaKnown RBP2.03□□□□□ -2.08
CCDC7-208ENST00000537047 TMEM14AQ9Y6G1 99 aa2.03□□□□□ -2.08
CCDC7-208ENST00000537047 GOLGA8SH3BPF8 625 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 RBFOX2O43251 390 aaKnown RBP eCLIP2.02□□□□□ -2.09
CCDC7-208ENST00000537047 KRT8P05787 483 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 POLR2MP0CAP2 368 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 SSR1P43307 286 aaKnown RBP2.02□□□□□ -2.09
CCDC7-208ENST00000537047 NAMPTP43490 491 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 GPR6P46095 362 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-208ENST00000537047 CCR8P51685 355 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 SCRN3Q0VDG4 424 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 ABHD13Q7L211 337 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 BIVMQ86UB2 503 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 OR52P1PQ8NH57 321 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 RLN3Q8WXF3 142 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 RGP1Q92546 391 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-208ENST00000537047 SGK3Q96BR1 496 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 C16orf45Q96MC5 204 aaPredicted RBP2.02□□□□□ -2.09
CCDC7-208ENST00000537047 SPNS1Q9H2V7 528 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 HMG20AQ9NP66 347 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 ADAP2Q9NPF8 381 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 SLC35D1Q9NTN3 355 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 FBN3Q75N90 2809 aa2.02□□□□□ -2.09
CCDC7-208ENST00000537047 PNPLA6Q8IY17 1366 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 A0A0B4J2A0 478 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 KMOO15229 486 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 RRP8O43159 456 aaKnown RBP2.01□□□□□ -2.09
CCDC7-208ENST00000537047 PRKAB2O43741 272 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 RAMP3O60896 148 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 GABARAPO95166 117 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 AK4P27144 223 aaPredicted RBP2.01□□□□□ -2.09
CCDC7-208ENST00000537047 PSMA5P28066 241 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 NCBP2P52298 156 aaKnown RBP eCLIP2.01□□□□□ -2.09
CCDC7-208ENST00000537047 UGT2B15P54855 530 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 TCP10Q12799 353 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 FILIP1LQ4L180 1135 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 DNLZQ5SXM8 178 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 TMEM179Q6ZVK1 233 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 RIMKLAQ8IXN7 391 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 ZNF679Q8IYX0 411 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 FAM133AQ8N9E0 248 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 MFSD9Q8NBP5 474 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 TM4SF18Q96CE8 201 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 RPRD1AQ96P16 312 aaPredicted RBP2.01□□□□□ -2.09
CCDC7-208ENST00000537047 SLC38A2Q96QD8 506 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 ZNF382Q96SR6 550 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 YY1AP1Q9H869 796 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 TMOD2Q9NZR1 351 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 SHPKQ9UHJ6 478 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 SNX6Q9UNH7 406 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 RFNGQ9Y644 331 aa2.01□□□□□ -2.09
CCDC7-208ENST00000537047 MSH6P52701 1360 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 K7EQM0 130 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 ARPC3O15145 178 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 NOL3O60936 208 aaKnown RBP2□□□□□ -2.09
CCDC7-208ENST00000537047 ERLIN2O94905 339 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 FABP3P05413 133 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 IGHV1-8P0DP01 117 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 CALM1P0DP23 149 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 CALM2P0DP24 149 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 CALM3P0DP25 149 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 DBTP11182 482 aaKnown RBP2□□□□□ -2.09
CCDC7-208ENST00000537047 SOX6P35712 828 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 HSD17B2P37059 387 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 CX3CR1P49238 355 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 POLR2FP61218 127 aaKnown RBP2□□□□□ -2.09
CCDC7-208ENST00000537047 RPS21P63220 83 aaKnown RBP2□□□□□ -2.09
CCDC7-208ENST00000537047 SFT2D3Q587I9 215 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 TRIM40Q6P9F5 258 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 ZNF493Q6ZR52 646 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 LINC00173Q6ZV60 143 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 PIANPQ8IYJ0 282 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 CEP112Q8N8E3 955 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 MED8Q96G25 268 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 HSFY1Q96LI6 401 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 ZNF607Q96SK3 696 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 SORT1Q99523 831 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 KCTD14Q9BQ13 255 aaPredicted RBP2□□□□□ -2.09
CCDC7-208ENST00000537047 ISYNA1Q9NPH2 558 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 GPATCH2LQ9NWQ4 482 aa2□□□□□ -2.09
CCDC7-208ENST00000537047 MRPS7Q9Y2R9 242 aaKnown RBP2□□□□□ -2.09
CCDC7-208ENST00000537047 CENPJQ9HC77 1338 aaPredicted RBP1.99□□□□□ -2.09
CCDC7-208ENST00000537047 IGLV3-22A0A075B6J6 115 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 IGKV3D-11A0A0A0MRZ8 115 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 IGHV3-74A0A0B4J1X5 117 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 A0A1B0GVI7 797 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 A0A1B0GVX0 72 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 H0YHG0 523 aa1.99□□□□□ -2.09
CCDC7-208ENST00000537047 RAD51BO15315 384 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms