RNA–Protein interactions for RNA: ENST00000536255.6

RPAIN-205, Transcript of RPA interacting protein, humanhuman

TSL 1 (best) BASIC

Gene RPAIN, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-205ENST00000536255 ITGA5P08648 1049 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 ACTR3P61158 418 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 RPL27P61353 136 aaKnown RBP11.9□□□□□ -0.5
RPAIN-205ENST00000536255 ROR2Q01974 943 aaKnown RBP11.9□□□□□ -0.5
RPAIN-205ENST00000536255 TSPAN31Q12999 210 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 CCNIQ14094 377 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 MELKQ14680 651 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 FREM1Q5H8C1 2179 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 RPL13AP3Q6NVV1 102 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 PGBD2Q6P3X8 592 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 SMARCD3Q6STE5 483 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 C17orf78Q8N4C9 275 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 FANK1Q8TC84 345 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 GIPC3Q8TF64 312 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 ASB10Q8WXI3 467 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 HSD17B8Q92506 261 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 SLCO4A1Q96BD0 722 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 MUCL1Q96DR8 90 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 PIK3IP1Q96FE7 263 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 PLEKHF2Q9H8W4 249 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 NGBQ9NPG2 151 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 ST6GALNAC2Q9UJ37 374 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 ITGB1BP2Q9UKP3 347 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 EDARQ9UNE0 448 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 MGAT4BQ9UQ53 548 aa11.9□□□□□ -0.5
RPAIN-205ENST00000536255 CCDC168Q8NDH2 2452 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 A6NIZ1 184 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 M0R3G1 203 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 TIPRLO75663 272 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 RAD51DO75771 328 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 ACADSP16219 412 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 GSTM3P21266 225 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 FASP25445 335 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 GSSP48637 474 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 CLRN1P58418 232 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 RAP1BP61224 184 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 RAP1AP62834 184 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 PPP1R8Q12972 351 aaKnown RBP11.89□□□□□ -0.51
RPAIN-205ENST00000536255 TOP3AQ13472 1001 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-205ENST00000536255 FHL1Q13642 323 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 STK11Q15831 433 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 ZSCAN26Q16670 478 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 TIMM23BQ5SRD1 257 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 GPR139Q6DWJ6 353 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 ZFP1Q6P2D0 407 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 KLHL24Q6TFL4 600 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 PAMR1Q6UXH9 720 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 WFDC8Q8IUA0 241 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 LRRC75AQ8NAA5 344 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 AQP11Q8NBQ7 271 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 OR10G2Q8NGC3 310 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 OR9Q2Q8NGE9 314 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 FNDC8Q8TC99 324 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 NINJ1Q92982 152 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 MUS81Q96NY9 551 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 GPX7Q96SL4 187 aaPredicted RBP11.89□□□□□ -0.51
RPAIN-205ENST00000536255 BDH2Q9BUT1 245 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 KATNB1Q9BVA0 655 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 DGCR6LQ9BY27 220 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 ULBP2Q9BZM5 246 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 CRLF2Q9HC73 371 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 GPR35Q9HC97 309 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 VNN3Q9NY84 501 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 GLTPQ9NZD2 209 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 GRHPRQ9UBQ7 328 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 AKAP9Q99996 3911 aa11.89□□□□□ -0.51
RPAIN-205ENST00000536255 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-205ENST00000536255 OR5H1A6NKK0 313 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 XKRYO14609 159 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ENTPD5O75356 428 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 GASTP01350 101 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 PGA4P0DJD7 388 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 PGA3P0DJD8 388 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 CDH2P19022 906 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-205ENST00000536255 PAX7P23759 505 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 LOXP28300 417 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-205ENST00000536255 SLC6A6P31641 620 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ACVR1BP36896 505 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 RPS6KA3P51812 740 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 LGALS3BPQ08380 585 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 COX10Q12887 443 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 KPNB1Q14974 876 aaKnown RBP11.88□□□□□ -0.51
RPAIN-205ENST00000536255 TAB1Q15750 504 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ATP6AP1Q15904 470 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 GABRA6Q16445 453 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 CEACAM16Q2WEN9 425 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 RFX4Q33E94 735 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 BEX5Q5H9J7 111 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ARMC4Q5T2S8 1044 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 C9orf135Q5VTT2 229 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 ZNF770Q6IQ21 691 aaPredicted RBP11.88□□□□□ -0.51
RPAIN-205ENST00000536255 DPY19L2P2Q6ZN68 376 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 IGFN1Q86VF2 1251 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 NOXO1Q8NFA2 376 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 OR52L1Q8NGH7 329 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 TMEM54Q969K7 222 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 NRBF2Q96F24 287 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 BOD1Q96IK1 185 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 HS3ST6Q96QI5 342 aa11.88□□□□□ -0.51
RPAIN-205ENST00000536255 GPA33Q99795 319 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms