RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 CARD17Q5XLA6 110 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 ZC3HAV1Q7Z2W4 902 aaKnown RBP13.78□□□□□ -0.2
CNN1-202ENST00000535659 C20orf196Q8IYI0 205 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 IQCF1Q8N6M8 205 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 LILRB4Q8NHJ6 448 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 RASD2Q96D21 266 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 TEX12Q9BXU0 123 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 GRIP2Q9C0E4 1043 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 VCX3BQ9H321 246 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 TOR3AQ9H497 397 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 SLC25A19Q9HC21 320 aa13.78□□□□□ -0.2
CNN1-202ENST00000535659 SMPD3Q9NY59 655 aaPredicted RBP13.78□□□□□ -0.2
CNN1-202ENST00000535659 ZAR1LA6NP61 321 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 A8MXE2 369 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 CENPBD1B2RD01 187 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 DLGAP1O14490 977 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 MSTNO14793 375 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 AHCYL1O43865 530 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 IGHG1P01857 330 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 PGA4P0DJD7 388 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 PGA3P0DJD8 388 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 HIST1H1CP16403 213 aaKnown RBP13.77□□□□□ -0.21
CNN1-202ENST00000535659 GRK5P34947 590 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 CDKN2AP42771 156 aaKnown RBP13.77□□□□□ -0.21
CNN1-202ENST00000535659 KRR1Q13601 381 aaKnown RBP13.77□□□□□ -0.21
CNN1-202ENST00000535659 PGGHGQ32M88 737 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 MESTQ5EB52 335 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 ZNF362Q5T0B9 420 aaPredicted RBP13.77□□□□□ -0.21
CNN1-202ENST00000535659 TSPO2Q5TGU0 170 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 FBXW9Q5XUX1 488 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 XKRXQ6PP77 449 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 TFAP2EQ6VUC0 442 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 MRGPRGQ86SM5 289 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 UBE2J2Q8N2K1 259 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 POMGNT2Q8NAT1 580 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 SYT14Q8NB59 555 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 OR6N1Q8NGY5 312 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 OR4K13Q8NH42 304 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 HDAC2Q92769 488 aaKnown RBP13.77□□□□□ -0.21
CNN1-202ENST00000535659 TMEM54Q969K7 222 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 RBP7Q96R05 134 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 MBOAT4Q96T53 435 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 KCNK17Q96T54 332 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 LINC00470Q9BZP3 86 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 OPN3Q9H1Y3 402 aaPredicted RBP13.77□□□□□ -0.21
CNN1-202ENST00000535659 RASSF4Q9H2L5 321 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 SLCO5A1Q9H2Y9 848 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 SLC7A10Q9NS82 523 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 UPB1Q9UBR1 384 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 PRSS50Q9UI38 385 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 NAV2Q8IVL1 2488 aa13.77□□□□□ -0.21
CNN1-202ENST00000535659 UPK3AO75631 287 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 KRT33AO76009 404 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 CNOT4O95628 575 aaKnown RBP13.76□□□□□ -0.21
CNN1-202ENST00000535659 IGHV3-9P01782 118 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 AGAP20933 346 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 CSNK1A1P48729 337 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 CLRN1P58418 232 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 HIST3H3Q16695 136 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 SLX4IPQ5VYV7 408 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 BEND4Q6ZU67 534 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 ADCK1Q86TW2 530 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 GPR137CQ8N3F9 429 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 OR52E2Q8NGJ4 325 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 ALG12Q9BV10 488 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 FAM118AQ9NWS6 357 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 GLTPQ9NZD2 209 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 JKAMPQ9P055 326 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 KLHL21Q9UJP4 597 aa13.76□□□□□ -0.21
CNN1-202ENST00000535659 FOXD3Q9UJU5 478 aaPredicted RBP13.76□□□□□ -0.21
CNN1-202ENST00000535659 PRSS37A4D1T9 235 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 H0YJX3 145 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 M0R3G1 203 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 ZG16O60844 167 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 IFNGP01579 166 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.75□□□□□ -0.21
CNN1-202ENST00000535659 LGALS3BPQ08380 585 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 PHYHD1Q5SRE7 291 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 THEM4Q5T1C6 240 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 LRFN4Q6PJG9 635 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 Q6ZT83 130 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 PTCHD4Q6ZW05 846 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 LUZP2Q86TE4 346 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 JAZF1Q86VZ6 243 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 RELL2Q8NC24 303 aaPredicted RBP13.75□□□□□ -0.21
CNN1-202ENST00000535659 FNDC8Q8TC99 324 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 CA5BP1Q8WTZ4 195 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 HRASLS5Q96KN8 279 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 NMNAT3Q96T66 252 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 DDOQ99489 341 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 B3GAT2Q9NPZ5 323 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 CMC2Q9NRP2 79 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 ASB6Q9NWX5 421 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 TVP23BQ9NYZ1 205 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 VSX1Q9NZR4 365 aaPredicted RBP13.75□□□□□ -0.21
CNN1-202ENST00000535659 ALPK2Q86TB3 2170 aa13.75□□□□□ -0.21
CNN1-202ENST00000535659 LOC100130705A0A1B0GUX0 176 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 SLC22A23A1A5C7 686 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 EEF1E1-BLOC1S5C9J1V9 151 aa13.74□□□□□ -0.21
CNN1-202ENST00000535659 E9PQ18 207 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms