RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 ESRP2Q9H6T0 727 aaKnown RBP11.7□□□□□ -0.54
CMTM1-219ENST00000533953 NOX3Q9HBY0 568 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 POFUT2Q9Y2G5 429 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 ADAM18Q9Y3Q7 739 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 RNF115Q9Y4L5 304 aa11.7□□□□□ -0.54
CMTM1-219ENST00000533953 IGKV1D-43A0A0B4J1Z2 117 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 H7C1C5 153 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 ABCD4O14678 606 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 IMPA2O14732 288 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 GOSR1O95249 250 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 ATE1O95260 518 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 SLC2A10O95528 541 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 HLA-HP01893 362 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 CELA3BP08861 270 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 B4GALT1P15291 398 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 ACADSP16219 412 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 CD53P19397 219 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 CD40P25942 277 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 ACVR1BP36896 505 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 SLC9A3P48764 834 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 NR1H2P55055 460 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 CLRN1P58418 232 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 FXYD6P3P58550 94 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 UBE2NP61088 152 aaKnown RBP11.69□□□□□ -0.54
CMTM1-219ENST00000533953 LCN6P62502 163 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 CBX1P83916 185 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 FMODQ06828 376 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 PIGFQ07326 219 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 KEAP1Q14145 624 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 ZBED5Q49AG3 693 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 PAMR1Q6UXH9 720 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 ZNF813Q6ZN06 617 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 PIWIL3Q7Z3Z3 882 aaKnown RBP11.69□□□□□ -0.54
CMTM1-219ENST00000533953 MYPOPQ86VE0 399 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-219ENST00000533953 ADGRG5Q8IZF4 528 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 PIAS4Q8N2W9 510 aaPredicted RBP11.69□□□□□ -0.54
CMTM1-219ENST00000533953 FGFBP3Q8TAT2 258 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 CANT1Q8WVQ1 401 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 ADAD1Q96M93 576 aaKnown RBP11.69□□□□□ -0.54
CMTM1-219ENST00000533953 TSPAN32Q96QS1 320 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 MRPL13Q9BYD1 178 aaKnown RBP11.69□□□□□ -0.54
CMTM1-219ENST00000533953 TXNIPQ9H3M7 391 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 MUC13Q9H3R2 512 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 NGBQ9NPG2 151 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 B3GAT2Q9NPZ5 323 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 AURKCQ9UQB9 309 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 POMPQ9Y244 141 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 SIGLEC7Q9Y286 467 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 AMDHD2Q9Y303 409 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 U3KQV3 271 aa11.69□□□□□ -0.54
CMTM1-219ENST00000533953 IGHV1-18A0A0C4DH31 117 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 UNC119BA6NIH7 251 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 ZNF99A8MXY4 864 aaPredicted RBP11.68□□□□□ -0.54
CMTM1-219ENST00000533953 SHISA9B4DS77 424 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 TNFRSF11BO00300 401 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 DHHO43323 396 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 OR10H3O60404 316 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 HOXC12P31275 282 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 CDAP32320 146 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 RPL4P36578 427 aaKnown RBP11.68□□□□□ -0.54
CMTM1-219ENST00000533953 MAGEA2P43356 314 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 CAPZA2P47755 286 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 SMIM11AP58511 58 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 RPL27P61353 136 aaKnown RBP11.68□□□□□ -0.54
CMTM1-219ENST00000533953 CHRNB3Q05901 458 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 TRAP1Q12931 704 aaKnown RBP11.68□□□□□ -0.54
CMTM1-219ENST00000533953 FAM98BQ52LJ0 330 aaKnown RBP11.68□□□□□ -0.54
CMTM1-219ENST00000533953 MTX3Q5HYI7 312 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 B3GLCTQ6Y288 498 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 MDP1Q86V88 176 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 SPATA24Q86W54 205 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 C17orf78Q8N4C9 275 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 OR9Q2Q8NGE9 314 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 OR4C15Q8NGM1 316 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 NSMAFQ92636 917 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 MCHR2Q969V1 340 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 RSRC1Q96IZ7 334 aaKnown RBP11.68□□□□□ -0.54
CMTM1-219ENST00000533953 Q96M85 177 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 SH3GL3Q99963 347 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 KATNB1Q9BVA0 655 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 CHID1Q9BWS9 393 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 SLC7A8Q9UHI5 535 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 TMEM5Q9Y2B1 443 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 LYVE1Q9Y5Y7 322 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 CSMD2Q7Z408 3487 aa11.68□□□□□ -0.54
CMTM1-219ENST00000533953 CADP27708 2225 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 HTR3EA5X5Y0 456 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 HS3ST1O14792 307 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 ARHGEF9O43307 516 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 IGHG1P01857 330 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 RAF1P04049 648 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 CD79AP11912 226 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 DNASE1P24855 282 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 DAP3P51398 398 aaKnown RBP11.67□□□□□ -0.54
CMTM1-219ENST00000533953 ART1P52961 327 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 FLOT2Q14254 428 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 HIST3H3Q16695 136 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 OTPQ5XKR4 325 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 PGBD2Q6P3X8 592 aa11.67□□□□□ -0.54
CMTM1-219ENST00000533953 SLC22A25Q6T423 547 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms