RNA–Protein interactions for RNA: ENST00000532566.3

PCDHA3-202, Transcript of protocadherin alpha 3, humanhuman

BASIC

Gene PCDHA3, Length 4,594 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA3-202ENST00000532566 GLS2Q9UI32 602 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 KCNS2Q9ULS6 477 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 A6NCN8 305 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 HMGB3O15347 200 aaKnown RBP14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 UBCP0CG48 685 aaKnown RBP14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 HCCSP53701 268 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 FCN2Q15485 313 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 EMC4Q5J8M3 183 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 SLC35B4Q969S0 331 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 LAT2Q9GZY6 243 aa14.03□□□□□ -0.16
PCDHA3-202ENST00000532566 DVL2O14641 736 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 MOSPD3O75425 235 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 TRAPPC2P0DI81 140 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 TRAPPC2BP0DI82 140 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 CCR9P51686 369 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 GTPBP8Q8N3Z3 284 aaPredicted RBP14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 STEAP2Q8NFT2 490 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 FKRPQ9H9S5 495 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 CHRNA9Q9UGM1 479 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 STEAP1Q9UHE8 339 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 PIGBOS1A0A0B4J2F0 54 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 C2CD4DB7Z1M9 353 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 ZNF35P13682 527 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 UQCRC1P31930 480 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 GLYR1Q49A26 553 aaPredicted RBP14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 C3P1Q6ZMU1 363 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 SFTPA1Q8IWL2 248 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 OR6M1Q8NGM8 313 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 FAM3DQ96BQ1 224 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 MAN2C1Q9NTJ4 1040 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 BOKQ9UMX3 212 aaPredicted RBP14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 WIF1Q9Y5W5 379 aa14.02□□□□□ -0.16
PCDHA3-202ENST00000532566 ZNF638Q14966 1978 aaKnown RBP14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 TMEM82A0PJX8 343 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 LILRA5A6NI73 299 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 FABP7O15540 132 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 IGHA2P01877 340 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 HLA-AP01891 365 aaKnown RBP14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 CD79AP11912 226 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 CDK2P24941 298 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 SSTR2P30874 369 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 DLSTP36957 453 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 FXYD4P59646 89 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 PCBD1P61457 104 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 ELP2Q6IA86 826 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 ARSKQ6UWY0 536 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 Q6ZS52 159 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 ARIH2OSQ8N7S6 290 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 CCDC74AQ96AQ1 378 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 OR2A5Q96R48 311 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 TCEAL2Q9H3H9 227 aaPredicted RBP14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 SIRT3Q9NTG7 399 aaPredicted RBP14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 ZFP57Q9NU63 452 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 COA3Q9Y2R0 106 aaPredicted RBP14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 NUDT21O43809 227 aaKnown RBP14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 EMDP50402 254 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 C10orf111Q8N326 155 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 CCDC71LQ8N9Z2 235 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 CTRCQ99895 268 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 FOXQ1Q9C009 403 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 ENKD1Q9H0I2 346 aa14.02□□□□□ -0.17
PCDHA3-202ENST00000532566 P2RY10O00398 339 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 PRKNO60260 465 aaPredicted RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 GAAP10253 952 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 EVX1P49640 407 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 RPL18Q07020 188 aaKnown RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 GLYATL3Q5SZD4 288 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 DCAF12Q5T6F0 453 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 IDO2Q6ZQW0 420 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 DCXRQ7Z4W1 244 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 DCUN1D4Q92564 292 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 SMIM19Q96E16 107 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 MED18Q9BUE0 208 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 TMEM59Q9BXS4 323 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 OR52A1Q9UKL2 312 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 LMO7DNF2Z398 122 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 EIF1BO60739 113 aaKnown RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 IGHEP01854 428 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 SERPINA2P20848 420 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 GABRR1P24046 479 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 APOBEC1P41238 236 aaKnown RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 VEGFCP49767 419 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 CCR6P51684 374 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 GK2Q14410 553 aaPredicted RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 CDK5R1Q15078 307 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 ACKR1Q16570 336 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 FAM109BQ6ICB4 259 aaPredicted RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 VN1R4Q7Z5H5 301 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 CLEC1AQ8NC01 280 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 LILRB4Q8NHJ6 448 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 ZNF775Q96BV0 537 aaPredicted RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 ZG16BQ96DA0 208 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 ZNF764Q96H86 408 aaPredicted RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 LRRC61Q9BV99 259 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 CDH20Q9HBT6 801 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 WSB2Q9NYS7 404 aaPredicted RBP14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 DOK2O60496 412 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 NKX2-2O95096 273 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 RAF1P04049 648 aa14.01□□□□□ -0.17
PCDHA3-202ENST00000532566 HOXB3P14651 431 aaPredicted RBP14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms