RNA–Protein interactions for RNA: ENST00000532375.5

TSPAN4-220, Transcript of tetraspanin 4, humanhuman

TSL 5

Gene TSPAN4, Length 518 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-220ENST00000532375 SAGP10523 405 aaPredicted RBP12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 HOXB1P14653 301 aaPredicted RBP12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ACADSP16219 412 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 CD53P19397 219 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 CSNK1A1P48729 337 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 PRPS1P60891 318 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ZBED5Q49AG3 693 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ALG10Q5BKT4 473 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 FGD3Q5JSP0 725 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 FBXW10Q5XX13 1052 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 THSD4Q6ZMP0 1018 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 OAFQ86UD1 273 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 HDAC2Q92769 488 aaKnown RBP12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 NEUROG1Q92886 237 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 NINJ1Q92982 152 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF566Q969W8 418 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 MCUR1Q96AQ8 359 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF75AQ96N20 296 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ALPK1Q96QP1 1244 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 KCNK17Q96T54 332 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 C1QTNF6Q9BXI9 259 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ESRP2Q9H6T0 727 aaKnown RBP12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 OBP2BQ9NPH6 170 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 VNN3Q9NY84 501 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 B3GNT2Q9NY97 397 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF224Q9NZL3 707 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 CRNNQ9UBG3 495 aaPredicted RBP12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF346Q9UL40 294 aaKnown RBP12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 POMPQ9Y244 141 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 TMEM5Q9Y2B1 443 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 PLEKHA6Q9Y2H5 1048 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 LYVE1Q9Y5Y7 322 aa12.17□□□□□ -0.46
TSPAN4-220ENST00000532375 ARID1AO14497 2285 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 A0A1W2PRG6 482 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 AQP12BA6NM10 295 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 CENPBD1B2RD01 187 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 MCIDASD6RGH6 385 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 SEC14L2O76054 403 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 CD40P25942 277 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 RRM2P31350 389 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF83P51522 516 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 SMIM11AP58511 58 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 CTXN1P60606 82 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 SPIBQ01892 262 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF770Q6IQ21 691 aaPredicted RBP12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 C1orf94Q6P1W5 598 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 RRM2BQ7LG56 351 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 FAM122BQ7Z309 247 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 IGFN1Q86VF2 1251 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 AQP12AQ8IXF9 295 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 CDK20Q8IZL9 346 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 FAM169BQ8N8A8 192 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 OR6N1Q8NGY5 312 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF519Q8TB69 540 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 CANT1Q8WVQ1 401 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 MCHR2Q969V1 340 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 MBD6Q96DN6 1003 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 TSPAN32Q96QS1 320 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 CCM2LQ9NUG4 571 aaPredicted RBP12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 SLC7A8Q9UHI5 535 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 RNF115Q9Y4L5 304 aa12.16□□□□□ -0.46
TSPAN4-220ENST00000532375 IGKV1D-43A0A0B4J1Z2 117 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 DHHO43323 396 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 KRT36O76013 467 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 IGKV3-15P01624 115 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 IGLV1-44P01699 117 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 IGHG1P01857 330 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 RAF1P04049 648 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 CD3EP07766 207 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 QDPRP09417 244 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 PTAFRP25105 342 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 GSSP48637 474 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 DAP3P51398 398 aaKnown RBP12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 RPL27P61353 136 aaKnown RBP12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 TUBA1BP68363 451 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 TUBA4AP68366 448 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 SPOCK1Q08629 439 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 PPP1R8Q12972 351 aaKnown RBP12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 TAF11Q15544 211 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 TUBA1AQ71U36 451 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 CLDN22Q8N7P3 220 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 ZNF611Q8N823 705 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 SYT14Q8NB59 555 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 KBTBD8Q8NFY9 601 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 FGFBP3Q8TAT2 258 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 AKAP1Q92667 903 aaKnown RBP eCLIP12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 GPX7Q96SL4 187 aaPredicted RBP12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 ULBP2Q9BZM5 246 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 TRIM15Q9C019 465 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 CXXC4Q9H2H0 198 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 NOX3Q9HBY0 568 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 NRIP3Q9NQ35 241 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 UGT2A1Q9Y4X1 527 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 USF3Q68DE3 2245 aa12.15□□□□□ -0.46
TSPAN4-220ENST00000532375 IGHV1-18A0A0C4DH31 117 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 TCRBV3S1A0A5B6 114 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 ABCD4O14678 606 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 HS3ST1O14792 307 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 ATP5HO75947 161 aa12.14□□□□□ -0.47
TSPAN4-220ENST00000532375 CD14P08571 375 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms