RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 GLRXP35754 106 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 CRISP3P54108 245 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 KRTAP10-3P60369 221 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 SEC61A1P61619 476 aaKnown RBP7.62□□□□□ -1.19
USF1-210ENST00000531842 BAMBIQ13145 260 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 SCGB2A2Q13296 93 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 C1DQ13901 141 aaKnown RBP7.62□□□□□ -1.19
USF1-210ENST00000531842 MFSD13AQ14CX5 517 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 NKPD1Q17RQ9 610 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 GSG1Q2KHT4 349 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 GTDC1Q4AE62 458 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 ZNF813Q6ZN06 617 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 USP51Q70EK9 711 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 SERPINA11Q86U17 422 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 ICA1LQ8NDH6 482 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 ZNF417Q8TAU3 575 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 TAAR8Q969N4 342 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 C7orf26Q96N11 449 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 ZNF587Q96SQ5 575 aaPredicted RBP7.62□□□□□ -1.19
USF1-210ENST00000531842 MS4A5Q9H3V2 200 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 PIF1Q9H611 641 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 RMND5AQ9H871 391 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 VIPAS39Q9H9C1 493 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 SDR39U1Q9NRG7 319 aaPredicted RBP7.62□□□□□ -1.19
USF1-210ENST00000531842 TNFRSF19Q9NS68 423 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 MED29Q9NX70 200 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 UBAP1Q9NZ09 502 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 ARMCX1Q9P291 453 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 RCE1Q9Y256 329 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 RASD1Q9Y272 281 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 NOX1Q9Y5S8 564 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 USH1CQ9Y6N9 552 aa7.62□□□□□ -1.19
USF1-210ENST00000531842 A0A096LPI6 279 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 C17orf100A8MU93 164 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 ZNF99A8MXY4 864 aaPredicted RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 TRAPPC2LH3BP13 241 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 SERPINI2O75830 405 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 PRB2P02812 416 aaPredicted RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 BCHEP06276 602 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 GRPRP30550 384 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 RAD52P43351 418 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 IDH3AP50213 366 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 SH3BGRP55822 239 aaPredicted RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 DSTNP60981 165 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 RAB1AP62820 205 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 CAMK2DQ13557 499 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 SLC9A3R2Q15599 337 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 TUSC1Q2TAM9 212 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 TRMT5Q32P41 509 aaKnown RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 PDCD4Q53EL6 469 aaKnown RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 C6orf10Q5SRN2 563 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 HDXQ7Z353 690 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 COMTD1Q86VU5 262 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 SKA3Q8IX90 412 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 MSRB3Q8IXL7 192 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 C10orf111Q8N326 155 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 KIR3DL3Q8N743 410 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 GLB1L3Q8NCI6 653 aaPredicted RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 DEFB108BQ8NET1 73 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 SLC38A5Q8WUX1 472 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 VPS33AQ96AX1 596 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 ITCHQ96J02 903 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 ZNF416Q9BWM5 594 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 TPT1P8Q9HAU6 139 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 MOV10Q9HCE1 1003 aaKnown RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 THUMPD1Q9NXG2 353 aaKnown RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 RPS6KB2Q9UBS0 482 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 LEF1Q9UJU2 399 aaPredicted RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 PRDM4Q9UKN5 801 aa7.61□□□□□ -1.19
USF1-210ENST00000531842 ZNF443Q9Y2A4 671 aaPredicted RBP7.61□□□□□ -1.19
USF1-210ENST00000531842 RYR3Q15413 4870 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 IGKV1D-42A0A075B6H8 117 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 IGHV1-69-2A0A0G2JMI3 117 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 A0A0G2JPF8 293 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 ISPDA4D126 451 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 HNRNPCL2B2RXH8 293 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 HNRNPCL3B7ZW38 293 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 C5orf58C9J3I9 102 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 MS4A18H0YCH9 400 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 TPD52L2O43399 206 aaKnown RBP7.6□□□□□ -1.19
USF1-210ENST00000531842 HNRNPCL1O60812 293 aaKnown RBP7.6□□□□□ -1.19
USF1-210ENST00000531842 HNRNPCL4P0DMR1 293 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 OR8G3PP0DMU2 310 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 IGHV4-38-2P0DP08 117 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 HOXB1P14653 301 aaPredicted RBP7.6□□□□□ -1.19
USF1-210ENST00000531842 IDO1P14902 403 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 FPR2P25090 351 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 MRPL19P49406 292 aaKnown RBP7.6□□□□□ -1.19
USF1-210ENST00000531842 EVX1P49640 407 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 GALK2Q01415 458 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 POU3F1Q03052 451 aaPredicted RBP7.6□□□□□ -1.19
USF1-210ENST00000531842 MS4A18Q3C1V0 323 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 SPATA46Q5T0L3 261 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 RNF220Q5VTB9 566 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 WDR88Q6ZMY6 472 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 DOK3Q7L591 496 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 C20orf196Q8IYI0 205 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 MIER2Q8N344 545 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 MFSD8Q8NHS3 518 aa7.6□□□□□ -1.19
USF1-210ENST00000531842 STK35Q8TDR2 534 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms