RNA–Protein interactions for RNA: ENST00000530961.5

CCS-206, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 5

Gene CCS, Length 1,214 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-206ENST00000530961 LYZL6O75951 148 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 ITGA5P08648 1049 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 NR2C1P13056 603 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 HOXB4P17483 251 aaPredicted RBP13.46□□□□□ -0.25
CCS-206ENST00000530961 CSNK1A1P48729 337 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 SH3BGRP55822 239 aaPredicted RBP13.46□□□□□ -0.25
CCS-206ENST00000530961 RAP1BP61224 184 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 RPL27P61353 136 aaKnown RBP13.46□□□□□ -0.25
CCS-206ENST00000530961 RAP1AP62834 184 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 COX10Q12887 443 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 CAMK2DQ13557 499 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 SNTB1Q13884 538 aaKnown RBP13.46□□□□□ -0.25
CCS-206ENST00000530961 STK11Q15831 433 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 CARD17Q5XLA6 110 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 RPL13AP3Q6NVV1 102 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 ASB10Q8WXI3 467 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 TMEM54Q969K7 222 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 WFIKKN1Q96NZ8 548 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 REPIN1Q9BWE0 567 aaKnown RBP13.46□□□□□ -0.25
CCS-206ENST00000530961 POLDIP3Q9BY77 421 aaKnown RBP13.46□□□□□ -0.25
CCS-206ENST00000530961 DENND2DQ9H6A0 471 aaPredicted RBP13.46□□□□□ -0.25
CCS-206ENST00000530961 NTN4Q9HB63 628 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 ZNF226Q9NYT6 803 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 GLTPQ9NZD2 209 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 CRIM1Q9NZV1 1036 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 GRHPRQ9UBQ7 328 aa13.46□□□□□ -0.25
CCS-206ENST00000530961 M0R3G1 203 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 GOSR1O95249 250 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 PGA4P0DJD7 388 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 PGA3P0DJD8 388 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 APEHP13798 732 aaKnown RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 ACADSP16219 412 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 ZNF26P17031 533 aaPredicted RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 SLC6A6P31641 620 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 IST1P53990 364 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 ROR2Q01974 943 aaKnown RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 LGALS3BPQ08380 585 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 MELKQ14680 651 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 DAZAP2Q15038 168 aaPredicted RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 TIMM23BQ5SRD1 257 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 ANKRD34AQ69YU3 496 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 GPR139Q6DWJ6 353 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 SHQ1Q6PI26 577 aaKnown RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 CD300LDQ6UXZ3 194 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 RASSF6Q6ZTQ3 369 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 C17orf78Q8N4C9 275 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 ARIH2OSQ8N7S6 290 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 FANK1Q8TC84 345 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 FNDC8Q8TC99 324 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 S100PBPQ96BU1 408 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 ALKBH3Q96Q83 286 aaPredicted RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 FEVQ99581 238 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 ALG12Q9BV10 488 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 KATNB1Q9BVA0 655 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 MRPL13Q9BYD1 178 aaKnown RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 ULBP2Q9BZM5 246 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 OR52D1Q9H346 318 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 CRLF2Q9HC73 371 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 GPR35Q9HC97 309 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 NRIP3Q9NQ35 241 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 PDP1Q9P0J1 537 aaPredicted RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 ZNF346Q9UL40 294 aaKnown RBP13.45□□□□□ -0.26
CCS-206ENST00000530961 KIAA1549Q9HCM3 1950 aa13.45□□□□□ -0.26
CCS-206ENST00000530961 PHF3Q92576 2039 aaKnown RBP13.44□□□□□ -0.26
CCS-206ENST00000530961 AHCYL1O43865 530 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 TRMUO75648 421 aaKnown RBP13.44□□□□□ -0.26
CCS-206ENST00000530961 RAD51DO75771 328 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 ANXA8P13928 327 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 HOXB1P14653 301 aaPredicted RBP13.44□□□□□ -0.26
CCS-206ENST00000530961 PAX7P23759 505 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 ACVR1BP36896 505 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 RPS6KA3P51812 740 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 FOXG1P55316 489 aaPredicted RBP13.44□□□□□ -0.26
CCS-206ENST00000530961 CLRN1P58418 232 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 FXYD6P3P58550 94 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 ERVK-25P63136 954 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 RUNX1T1Q06455 604 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 TOP3AQ13472 1001 aaPredicted RBP13.44□□□□□ -0.26
CCS-206ENST00000530961 TSC22D1Q15714 1073 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 GABRA6Q16445 453 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 HIST3H3Q16695 136 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 SPNS3Q6ZMD2 512 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 ZNF620Q6ZNG0 422 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 IGFN1Q86VF2 1251 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 CLDN22Q8N7P3 220 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 OR5K1Q8NHB7 308 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 PYDC1Q8WXC3 89 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 GTPBP3Q969Y2 492 aaKnown RBP13.44□□□□□ -0.26
CCS-206ENST00000530961 MUCL1Q96DR8 90 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 C14orf79Q96F83 325 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 CENPNQ96H22 339 aaPredicted RBP13.44□□□□□ -0.26
CCS-206ENST00000530961 TSPAN32Q96QS1 320 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 ZNF556Q9HAH1 456 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 IL20Q9NYY1 176 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 CDH10Q9Y6N8 788 aa13.44□□□□□ -0.26
CCS-206ENST00000530961 DIDO1Q9BTC0 2240 aaKnown RBP13.43□□□□□ -0.26
CCS-206ENST00000530961 OR5H1A6NKK0 313 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 ZNF99A8MXY4 864 aaPredicted RBP13.43□□□□□ -0.26
CCS-206ENST00000530961 XKRYO14609 159 aa13.43□□□□□ -0.26
CCS-206ENST00000530961 IMPA2O14732 288 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms