RNA–Protein interactions for RNA: ENST00000529856.5

CCDC90B-216, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,039 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-216ENST00000529856 UBE2NP61088 152 aaKnown RBP11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 SPIBQ01892 262 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 RUNX1T1Q06455 604 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 KEAP1Q14145 624 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 TAF11Q15544 211 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 HIST3H3Q16695 136 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 ZBED5Q49AG3 693 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 ALG10Q5BKT4 473 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 ARMC4Q5T2S8 1044 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 PGM2L1Q6PCE3 622 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 LRFN4Q6PJG9 635 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 TMEM108Q6UXF1 575 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 C20orf204Q6ZNR8 217 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 OR4K5Q8NGD3 323 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 OR13C2Q8NGS9 318 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 ASB10Q8WXI3 467 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 AKAP1Q92667 903 aaKnown RBP eCLIP11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 MBD6Q96DN6 1003 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 MRPL13Q9BYD1 178 aaKnown RBP11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 ULBP2Q9BZM5 246 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 TXNIPQ9H3M7 391 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 MAGIXQ9H6Y5 334 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 POFUT2Q9Y2G5 429 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 CADP27708 2225 aa11.08□□□□□ -0.64
CCDC90B-216ENST00000529856 ROS1P08922 2347 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 MCIDASD6RGH6 385 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 M0R1B8 84 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 ABCD4O14678 606 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 HS3ST1O14792 307 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 PTP4A3O75365 173 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 TRMUO75648 421 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 DNAJC8O75937 253 aaPredicted RBP11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 IGHG1P01857 330 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 IGHMP01871 453 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 ACADSP16219 412 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 CD53P19397 219 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 CD40P25942 277 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 RRM2P31350 389 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 MAGEA2P43356 314 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 LIMS1P48059 325 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 HMGA2P52926 109 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 CTXN1P60606 82 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF627Q7L945 461 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 HDDC2Q7Z4H3 204 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 CCDC36Q8IYA8 594 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 CCDC124Q96CT7 223 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 FAM46AQ96IP4 442 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 RADILQ96JH8 1075 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 LRGUKQ96M69 825 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 ALPK1Q96QP1 1244 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 STX18Q9P2W9 335 aaKnown RBP11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 MGAT4BQ9UQ53 548 aa11.07□□□□□ -0.64
CCDC90B-216ENST00000529856 HEATR1Q9H583 2144 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 DSCAMO60469 2012 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 SHISA9B4DS77 424 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 GSC2O15499 205 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 DHHO43323 396 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 ATP5HO75947 161 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 KRT36O76013 467 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 STAMBPO95630 424 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 QDPRP09417 244 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF26P17031 533 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF133P52736 654 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 CLRN1P58418 232 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 RPL27P61353 136 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 TUBA1BP68363 451 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 TUBA4AP68366 448 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 CHRNB3Q05901 458 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 TESK1Q15569 626 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF672Q499Z4 452 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 FAM98BQ52LJ0 330 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF813Q6ZN06 617 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 TUBA1AQ71U36 451 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 ZER1Q7Z7L7 766 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 IGFN1Q86VF2 1251 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF611Q8N823 705 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 FAM169BQ8N8A8 192 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 KBTBD8Q8NFY9 601 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 HDAC2Q92769 488 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 NEUROG1Q92886 237 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 MCHR2Q969V1 340 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 GPA33Q99795 319 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 FOXB1Q99853 325 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 FOXC2Q99958 501 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 MOV10Q9HCE1 1003 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 KRCC1Q9NPI7 259 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 CRNNQ9UBG3 495 aaPredicted RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 ZNF346Q9UL40 294 aaKnown RBP11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 TMCC3Q9ULS5 477 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 AURKCQ9UQB9 309 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 SIGLEC7Q9Y286 467 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 OTOGQ6ZRI0 2925 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 MYO9AB2RTY4 2548 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 CCDC168Q8NDH2 2452 aa11.06□□□□□ -0.64
CCDC90B-216ENST00000529856 AKAP9Q99996 3911 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 IGHV1-18A0A0C4DH31 117 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 AQP12BA6NM10 295 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 SEC14L2O76054 403 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 CD14P08571 375 aa11.05□□□□□ -0.64
CCDC90B-216ENST00000529856 CBR1P16152 277 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms