RNA–Protein interactions for RNA: ENST00000529661.1

C11orf88-204, Transcript of chromosome 11 open reading frame 88, humanhuman

TSL 3

Gene C11orf88, Length 624 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf88-204ENST00000529661 CT62P0C5K7 136 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 UBTFL1P0CB47 393 aaPredicted RBP3.2□□□□□ -1.9
C11orf88-204ENST00000529661 STAG3L2P0CL84 134 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 TNNI1P19237 187 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 GABRR1P24046 479 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 ZBTB25P24278 435 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 APOC4P55056 127 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 STX17P56962 302 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 RAB11AP62491 216 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 RAB11BQ15907 218 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 CCDC14Q49A88 953 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 C1orf100Q5SVJ3 147 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 OTPQ5XKR4 325 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 C1orf94Q6P1W5 598 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF571Q7Z3V5 609 aaPredicted RBP3.2□□□□□ -1.9
C11orf88-204ENST00000529661 COMTD1Q86VU5 262 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 MFSD6LQ8IWD5 586 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 GABRG1Q8N1C3 465 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 PQLC3Q8N755 202 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 PYROXD1Q8WU10 500 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 FGF14Q92915 247 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 MARC2Q969Z3 335 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 ITCHQ96J02 903 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 MS4A4EQ96PG1 132 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 RIOK1Q9BRS2 568 aaKnown RBP3.2□□□□□ -1.9
C11orf88-204ENST00000529661 C20orf24Q9BUV8 137 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 POLR2J2Q9GZM3 115 aaKnown RBP3.2□□□□□ -1.9
C11orf88-204ENST00000529661 ACTR6Q9GZN1 396 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 IL22Q9GZX6 179 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 POLR2J3Q9H1A7 115 aaKnown RBP3.2□□□□□ -1.9
C11orf88-204ENST00000529661 OR51J1Q9H342 316 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 PLSCR3Q9NRY6 295 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 C20orf96Q9NUD7 363 aaPredicted RBP3.2□□□□□ -1.9
C11orf88-204ENST00000529661 ASF1AQ9Y294 204 aa3.2□□□□□ -1.9
C11orf88-204ENST00000529661 CDHR2Q9BYE9 1310 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 PSMB11A5LHX3 300 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 KRTAP4-16G5E9R7 235 aaPredicted RBP3.19□□□□□ -1.9
C11orf88-204ENST00000529661 PSMD11O00231 422 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 MMP23AO75900 390 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 TGM6O95932 706 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 APOA1P02647 267 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 FGF1P05230 155 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 ERCC1P07992 297 aaPredicted RBP3.19□□□□□ -1.9
C11orf88-204ENST00000529661 COX7A1P24310 79 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 YAP1P46937 504 aaKnown RBP3.19□□□□□ -1.9
C11orf88-204ENST00000529661 CCNG1P51959 295 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 MAP3K7CLP57077 242 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 SELENOTP62341 195 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 TRDNQ13061 729 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 TGFBIQ15582 683 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 KRTAP13-3Q3SY46 172 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 PLA2G4DQ86XP0 818 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 TCAIMQ8N3R3 496 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 TRIML2Q8N7C3 387 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 LKAAEAR1Q8TD35 194 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 ZNF578Q96N58 590 aaPredicted RBP3.19□□□□□ -1.9
C11orf88-204ENST00000529661 TSG101Q99816 390 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 RIOK2Q9BVS4 552 aaKnown RBP3.19□□□□□ -1.9
C11orf88-204ENST00000529661 IL26Q9NPH9 171 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 IL17CQ9P0M4 197 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 STOX2Q9P2F5 926 aaPredicted RBP3.19□□□□□ -1.9
C11orf88-204ENST00000529661 PSMC3IPQ9P2W1 217 aaPredicted RBP3.19□□□□□ -1.9
C11orf88-204ENST00000529661 NEUROG3Q9Y4Z2 214 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 BZW2Q9Y6E2 419 aaKnown RBP3.19□□□□□ -1.9
C11orf88-204ENST00000529661 ARHGAP23Q9P227 1491 aa3.19□□□□□ -1.9
C11orf88-204ENST00000529661 IGLV3-22A0A075B6J6 115 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 A0A1W2PPV4 95 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 AGPAT2O15120 278 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 PTNP21246 168 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 GSTM3P21266 225 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 TUBG1P23258 451 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 FBXW4P57775 412 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 ERVK-25P63136 954 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 PAX5Q02548 391 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 ATP6AP1Q15904 470 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 LCE3AQ5TA76 89 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 PDPK2PQ6A1A2 396 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 IL34Q6ZMJ4 242 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 Q6ZN92 141 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 LRRC74BQ6ZQY2 392 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 TGIF2LYQ8IUE0 185 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 FNDC5Q8NAU1 212 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 MARCH1Q8TCQ1 289 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 DTX3LQ8TDB6 740 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 ACMSDQ8TDX5 336 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 ACOT11Q8WXI4 607 aaPredicted RBP3.18□□□□□ -1.9
C11orf88-204ENST00000529661 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP3.18□□□□□ -1.9
C11orf88-204ENST00000529661 NRGNQ92686 78 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 RAB1CQ92928 201 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 KIAA1143Q96AT1 154 aaPredicted RBP3.18□□□□□ -1.9
C11orf88-204ENST00000529661 TMEM246Q9BRR3 403 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 GBA3Q9H227 469 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 FBXO44Q9H4M3 255 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 ELOVL6Q9H5J4 265 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 RNF167Q9H6Y7 350 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 TUBG2Q9NRH3 451 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 PITPNC1Q9UKF7 332 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 STARD10Q9Y365 291 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 LRRK1Q38SD2 2015 aa3.18□□□□□ -1.9
C11orf88-204ENST00000529661 A0A1B0GUH1 482 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms