RNA–Protein interactions for RNA: ENST00000526639.2

SNRNP35-203, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 35, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP35, Length 1,975 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP35-203ENST00000526639 IL1RL1Q01638 556 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 GABRA6Q16445 453 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 TIMM23BQ5SRD1 257 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 NCMAPQ5T1S8 102 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 ADAM5Q6NVV9 412 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 NIPAL3Q6P499 406 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 SHQ1Q6PI26 577 aaKnown RBP9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 TBPL2Q6SJ96 375 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 ZDHHC13Q8IUH4 622 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 HS3ST5Q8IZT8 346 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 PACRGLQ8N7B6 248 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 LILRB1Q8NHL6 650 aaPredicted RBP9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 AKAP1Q92667 903 aaKnown RBP eCLIP9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 MOGAT1Q96PD6 335 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 EPYCQ99645 322 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 NGBQ9NPG2 151 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 NPAP1Q9NZP6 1156 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 LYVE1Q9Y5Y7 322 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 ACANP16112 2415 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 ARID1AO14497 2285 aa9.78□□□□□ -0.84
SNRNP35-203ENST00000526639 TRAV36DV7A0A075B6V5 113 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 G3V2T6 193 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 KRT33AO76009 404 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 ZNF43P17038 809 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 FUT4P22083 530 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 CLDN17P56750 224 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 LTBQ06643 244 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 WDR88Q6ZMY6 472 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 CYP4Z1Q86W10 505 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 HIPK1Q86Z02 1210 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 C10orf53Q8N6V4 93 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 WFDC11Q8NEX6 87 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 OR4C15Q8NGM1 316 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 DNAJC9Q8WXX5 260 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 TMEM45BQ96B21 275 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 MUS81Q96NY9 551 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 ALKBH3Q96Q83 286 aaPredicted RBP9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 USB1Q9BQ65 265 aaKnown RBP9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 TMEM204Q9BSN7 226 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 SLCO5A1Q9H2Y9 848 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 C8orf4Q9NR00 106 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 B3GAT1Q9P2W7 334 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 SLC7A7Q9UM01 511 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 A4GNTQ9UNA3 340 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 RASD1Q9Y272 281 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 RNF115Q9Y4L5 304 aa9.77□□□□□ -0.84
SNRNP35-203ENST00000526639 DPPA5A6NC42 116 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 H0YJX3 145 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 TNFRSF11BO00300 401 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 UPK3AO75631 287 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 CD3EP07766 207 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 HLA-DOBP13765 273 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 DAG1Q14118 895 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 LAPTM4AQ15012 233 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 H1FNTQ75WM6 255 aaPredicted RBP9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 P2RY8Q86VZ1 359 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 PIK3C3Q8NEB9 887 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 KBTBD8Q8NFY9 601 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 PIGTQ969N2 578 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 NRBF2Q96F24 287 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 DHRS1Q96LJ7 313 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 PRRC1Q96M27 445 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 GABARAPL1Q9H0R8 117 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 RHCGQ9UBD6 479 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 LAMP3Q9UQV4 416 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 LRRC42Q9Y546 428 aa9.77□□□□□ -0.85
SNRNP35-203ENST00000526639 ALPK2Q86TB3 2170 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 RAI1Q7Z5J4 1906 aaPredicted RBP9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 MS4A18H0YCH9 400 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 KPNA4O00629 521 aaPredicted RBP9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 ABCD4O14678 606 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 CHP2O43745 196 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 ICMTO60725 284 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 FMO6PO60774 539 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 SMPD2O60906 423 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 GADD45GO95257 159 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 PRKACGP22612 351 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 HOXC12P31275 282 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 LIMS1P48059 325 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 ZNF83P51522 516 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 ARHGDIAP52565 204 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 HMGA2P52926 109 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 NKX6-1P78426 367 aaPredicted RBP9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 PIN1Q13526 163 aaPredicted RBP9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 C1DQ13901 141 aaKnown RBP9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 MS4A18Q3C1V0 323 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 OR7E24Q6IFN5 339 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 ZNF613Q6PF04 617 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 C5orf46Q6UWT4 87 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 LINC00114Q6XXX2 140 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 C1orf122Q6ZSJ8 110 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 LINGO2Q7L985 606 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 TGIF2LYQ8IUE0 185 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 POMGNT2Q8NAT1 580 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 OR52J3Q8NH60 311 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 PERPQ96FX8 193 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 OXGR1Q96P68 337 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 EVA1AQ9H8M9 152 aa9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 NMNAT1Q9HAN9 279 aaPredicted RBP9.76□□□□□ -0.85
SNRNP35-203ENST00000526639 BEX4Q9NWD9 120 aaPredicted RBP9.76□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms