RNA–Protein interactions for RNA: ENST00000526308.2

PCDHB18P-202, Transcript of protocadherin beta 18 pseudogene, humanhuman

BASIC

Gene PCDHB18P, Length 3,197 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18P-202ENST00000526308 RAB3AP20336 220 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 ITGB8P26012 769 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 SEC13P55735 322 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 CTXN1P60606 82 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 ARF3P61204 181 aaPredicted RBP12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 SRSF5Q13243 272 aaKnown RBP12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 LIN54Q6MZP7 749 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 CLRN3Q8NCR9 226 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 OR6N1Q8NGY5 312 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 NT5CQ8TCD5 201 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 RELTQ969Z4 430 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 OR2M4Q96R27 311 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 APOOQ9BUR5 198 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 KIR3DX1Q9H7L2 352 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 EXOSC3Q9NQT5 275 aaKnown RBP12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 SLC39A1Q9NY26 324 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 MRM2Q9UI43 246 aaKnown RBP12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 M0QYG6 137 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 KAT7O95251 611 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 CD1AP06126 327 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 NAT2P11245 290 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 RPL35P42766 123 aaKnown RBP12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 RPS21P63220 83 aaKnown RBP12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 CSRP2Q16527 193 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 ARHGAP40Q5TG30 622 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 STEAP1BQ6NZ63 245 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 DPY19L4Q7Z388 723 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 C12orf45Q8N5I9 185 aaPredicted RBP12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 CCDC107Q8WV48 283 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 SEC22AQ96IW7 307 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 LRFN5Q96NI6 719 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 FOXN4Q96NZ1 517 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 SLC17A4Q9Y2C5 497 aa12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 NOP16Q9Y3C1 178 aaKnown RBP12.53□□□□□ -0.4
PCDHB18P-202ENST00000526308 TMEM272A0A1B0GTI8 110 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 HPP00738 406 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 IGFALSP35858 605 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 AKR1C2P52895 323 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 AKR1C1Q04828 323 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 ZCCHC12Q6PEW1 402 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 DGAT2L6Q6ZPD8 337 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 TMEM17Q86X19 198 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 STEAP2Q8NFT2 490 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 OR6K3Q8NGY3 331 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 ZNF417Q8TAU3 575 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 GPR148Q8TDV2 347 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 CCDC74AQ96AQ1 378 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 NPAS1Q99742 590 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 ZNF426Q9BUY5 554 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 ZMAT3Q9HA38 289 aaKnown RBP12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 CACNA1IQ9P0X4 2223 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 VPS13AQ96RL7 3174 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 PRKNO60260 465 aaPredicted RBP12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 CTAG2O75638 210 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 AQP8O94778 261 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 AMY2AP04746 511 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 EIF2B5Q13144 721 aaKnown RBP12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 ITPRIPL2Q3MIP1 535 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 POMZP3Q6PJE2 187 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 SLC16A9Q7RTY1 509 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 FGF13Q92913 245 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 TSACCQ96A04 125 aaPredicted RBP12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 ZNF707Q96C28 371 aaPredicted RBP12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 RBM18Q96H35 190 aaKnown RBP12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 ZFYVE21Q9BQ24 234 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 UTP23Q9BRU9 249 aaKnown RBP12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 SLC6A17Q9H1V8 727 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 UPB1Q9UBR1 384 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 MLXQ9UH92 298 aa12.52□□□□□ -0.41
PCDHB18P-202ENST00000526308 TMEM82A0PJX8 343 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 PRSS38A1L453 326 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 CCSO14618 274 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 RDH16O75452 317 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 RAB3DO95716 219 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 IGKV1D-16P01601 117 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 HPGDP15428 266 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 PRPS1P60891 318 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 NDUFAF7Q7L592 441 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 LRRTM1Q86UE6 522 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 SLC43A2Q8N370 569 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 BPIFCQ8NFQ6 507 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 NKX6-2Q9C056 277 aaPredicted RBP12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 SLC25A32Q9H2D1 315 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 THAP10Q9P2Z0 257 aaPredicted RBP12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 PLEKHA6Q9Y2H5 1048 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 RFPL4AA6NLU0 287 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 DISC1C4P0D8 188 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 RFPL4AL1F8VTS6 287 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 H7C2Y5 167 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 CDC40O60508 579 aaKnown RBP eCLIP12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 GPANK1O95872 356 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 UBBP0CG47 229 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 UBCP0CG48 685 aaKnown RBP12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 RPA2P15927 270 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 CALCRP30988 508 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 RPS27AP62979 156 aaKnown RBP12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 UBA52P62987 128 aaKnown RBP12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 PSG6Q00889 435 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 GAB4Q2WGN9 574 aa12.51□□□□□ -0.41
PCDHB18P-202ENST00000526308 ALG10Q5BKT4 473 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms