RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 OR52E2Q8NGJ4 325 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 OR9Q1Q8NGQ5 310 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 OR1K1Q8NGR3 316 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 OR4Q3Q8NH05 313 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 OR4K13Q8NH42 304 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 OR5K1Q8NHB7 308 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 FGFBP3Q8TAT2 258 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 MAGEE2Q8TD90 523 aaPredicted RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNRF4Q8WWF5 429 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 LIPHQ8WWY8 451 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 NEUROG1Q92886 237 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TMEM54Q969K7 222 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF566Q969W8 418 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 MARVELD3Q96A59 401 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TMEM45BQ96B21 275 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 OTULINQ96BN8 352 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PIK3IP1Q96FE7 263 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF570Q96NI8 536 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 HS3ST6Q96QI5 342 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 NMNAT3Q96T66 252 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 CIB1Q99828 191 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SH3GL3Q99963 347 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TACO1Q9BSH4 297 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TSSK6Q9BXA6 273 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 LIME1Q9H400 295 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 MED20Q9H944 212 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SEC61A2Q9H9S3 476 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 NOX3Q9HBY0 568 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 GP6Q9HCN6 339 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 SRA1Q9HD15 236 aaKnown RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 KRCC1Q9NPI7 259 aaPredicted RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TBC1D23Q9NUY8 699 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PARPBPQ9NWS1 579 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 GLTPQ9NZD2 209 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 NPAP1Q9NZP6 1156 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 KIF17Q9P2E2 1029 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 GRHPRQ9UBQ7 328 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 REV1Q9UBZ9 1251 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 MALT1Q9UDY8 824 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 FOXD3Q9UJU5 478 aaPredicted RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 PRDM4Q9UKN5 801 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 OAZ3Q9UMX2 235 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 TMEM5Q9Y2B1 443 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 HIF3AQ9Y2N7 669 aa4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 KLF2Q9Y5W3 355 aaPredicted RBP4.04□□□□□ -1.76
CHMP4A-202ENST00000524955 COL12A1Q99715 3063 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 LOC102725191A0A1B0GVB3 256 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 A0A1W2PPR1 153 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC22A23A1A5C7 686 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 OR5H1A6NKK0 313 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 FAM183AA6NL82 134 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 G3V2T6 193 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 DCTN6O00399 190 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 XKRYO14609 159 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 CASKO14936 926 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 DHHO43323 396 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 AKAP8O43823 692 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC16A7O60669 478 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 DEAF1O75398 565 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 IGHG1P01857 330 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 HLA-HP01893 362 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 GYPBP06028 91 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 CD14P08571 375 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 CELA3BP08861 270 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 TSPAN19P0C672 248 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 CLUP10909 449 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 CD79AP11912 226 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 CCL2P13500 99 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 IGFBP2P18065 325 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 PSMB1P20618 241 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 COX5AP20674 150 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 EPHA2P29317 976 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 MPGP29372 298 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 NOS3P29474 1203 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SLC6A6P31641 620 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 PYCR1P32322 319 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 IFNGR2P38484 337 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 RPS27P42677 84 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 DAP3P51398 398 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 ELF3P78545 371 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 TLE4Q04727 773 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 NPRL3Q12980 569 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 KRR1Q13601 381 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 PPA1Q15181 289 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 RCN1Q15293 331 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 MEP1BQ16820 701 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 RFX4Q33E94 735 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 ZIK1Q3SY52 487 aaPredicted RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 TBRG1Q3YBR2 411 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 FBXL19-AS1Q494R0 122 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 LPCAT4Q643R3 524 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 ACSM5Q6NUN0 579 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 LEG1Q6P5S2 330 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 SHQ1Q6PI26 577 aaKnown RBP4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 B3GLCTQ6Y288 498 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 ZNF813Q6ZN06 617 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 DPY19L2P2Q6ZN68 376 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 RASSF6Q6ZTQ3 369 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 FAM122BQ7Z309 247 aa4.03□□□□□ -1.76
CHMP4A-202ENST00000524955 BCDIN3DQ7Z5W3 292 aaKnown RBP4.03□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms